DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and kita

DIOPT Version :10

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:XP_009292910.1 Gene:kita / 30256 ZFINID:ZDB-GENE-980526-464 Length:981 Species:Danio rerio


Alignment Length:951 Identity:231/951 - (24%)
Similarity:356/951 - (37%) Gaps:349/951 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RRSLLLTIIVV--TATVVSLISQEAEAHNQN-----APPILYVRERNWRISETEKVGQIIDRVRA 81
            ||:::..|:..  ..||:..::.:.:..|.|     ..|:    ..:.|.|.:.:.|..:::||.
Zfish   117 RRTIVFDIVAAEGDTTVIPCLATDPDMKNLNLQKCDGQPL----PNSLRYSASLETGVSVEKVRK 177

  Fly    82 EDPDGDDLIFGIEPRFSLPGGE--------NDASPP--------------EKIPFQIDRETGVVT 124
            |. :|..:..|.....::..|.        .||.||              ||:  .:...|..|.
Zfish   178 EF-EGCYVCVGTLDAATVKSGRYQLTVRLVPDAPPPITLGQPQRVLLTQGEKL--SLSCSTSNVN 239

  Fly   125 LNESLAGRA--GQNFLIY----------------------ITVTD-GSYT--AKNE-------VF 155
            .:.::..:|  |.|..::                      :|:.| |:|:  |.||       |:
Zfish   240 SDIAVKWKAPNGVNPSVHQNSHLLTEPITHVRTAILSLSSVTMQDAGNYSCEAINEKGTTAKPVW 304

  Fly   156 INILGERENSSGYRPQTSISNVVHNISQFLPRFDQLPGVQSIRNGLPNSRPGGW-YPPVPQNN-- 217
            :||.     ..|:...||:.|....:     |..:...::.:.|..|......| |..|...|  
Zfish   305 VNIY-----EKGFINITSVDNSTRRV-----RAGESLSLRVVMNAYPKPHTFSWSYSGVKLTNTT 359

  Fly   218 --IFGPPPFGNNYPP-------------------------------------------------- 230
              :......||:|..                                                  
Zfish   360 DHVITSRTHGNSYTSELKLVRLKVSESGIYTFSCLNRDATIRQTFEVHVISKPQIVSYEGPIDGQ 424

  Fly   231 --------PPPNI-------PGVRGEQSGEEEQPDEEVTPTTPVRISSTTP-------KSRTKLT 273
                    |.|.|       |..|........|.:|:|     |.::.|.|       :||..  
Zfish   425 VRCVAEGYPTPQIKWYYCDLPHSRCSNLLNATQEEEDV-----VTVTMTNPPFGKGAVESRLN-- 482

  Fly   274 PITANNSTRVESAIPAETTTPSGGHHNNSSSPITIFSLKSGTIP----IVVTVGGFFVAIAVLLA 334
             ||.||...:|....|           |.....|:||:...|:|    ..:.:|  |||.||:|.
Zfish   483 -ITKNNYATLECVASA-----------NGEIVYTLFSISENTVPHELFTPLLIG--FVAAAVILV 533

  Fly   335 YLCRRRLCAISRTLK-KTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQW---QGPVAFANRYV- 394
                  |..|..|.| ..|.|.::                        ||   :|  ...|.|| 
Zfish   534 ------LILIVLTYKYMQKPKYQI------------------------QWKVIEG--IHGNNYVY 566

  Fly   395 ------PWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENA 453
                  |::.                                                       
Zfish   567 IDPTQLPYDH------------------------------------------------------- 576

  Fly   454 FAGEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVAVKTLKESATEVDRKDL 518
                    :|||||.:|:|...||.||||:|....|..::..:.:.|||||.||.||...:::.|
Zfish   577 --------QWEFPRDKLRFGKTLGSGAFGKVVEATAYGMSKADTVMTVAVKMLKPSAHATEKEAL 633

  Fly   519 LSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHY----------- 572
            :|||:|:..|..|||:|:|||.||...||.||.||...|.|..:||..|...:|           
Zfish   634 MSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCFGDLLNFLRRRRVYFYYTTLGEDAYYRN 698

  Fly   573 -----------------------------------GNTHGKSNVLTSC-----------DLTSFM 591
                                               |:::..|:.::..           ||.||.
Zfish   699 VMMQSEPNDSRNGYMTMKPSVLGILSSENRRSLNKGDSYSDSDAVSEILQEDGLTLDTEDLLSFS 763

  Fly   592 YQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMAT 656
            ||||||||:|.|:..|||||||||||:|.....|:.|||.|||:.|...|..|...:||::||:.
Zfish   764 YQVAKGMDFLASKNCIHRDLAARNILLTQGRVAKICDFGLARDITTDSNYVVKGNARLPVKWMSP 828

  Fly   657 ESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISA-ADVMRKVRDGYRLEKPEHCRRELYNIM 720
            ||:::.:::.:||:||:|||:|||.:|||:||||:.. :...:.:::|||:|.||....|:|:||
Zfish   829 ESIFECVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMESPEFSPSEMYDIM 893

  Fly   721 YYCWSHDPQERPLFAEIIQMLDKLLHTEMDYIEL---ERFP 758
            :.||..||.:||.|::|::.:::.:.....:|.|   .|.|
Zfish   894 HSCWDADPVKRPSFSKIVEKIEQQISDSTKHIYLNFSSRLP 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 30/154 (19%)
PTKc 474..742 CDD:270623 123/325 (38%)
kitaXP_009292910.1 Ig_3 22..90 CDD:464046
IG_like 123..203 CDD:214653 15/84 (18%)
IG_like 218..307 CDD:214653 15/90 (17%)
Ig strand B 229..233 CDD:409353 0/5 (0%)
Ig strand C 241..245 CDD:409353 0/3 (0%)
Ig strand E 269..275 CDD:409353 0/5 (0%)
Ig strand F 287..292 CDD:409353 1/4 (25%)
IgI_4_SCFR 311..410 CDD:409446 14/103 (14%)
Ig strand A 311..317 CDD:409446 1/5 (20%)
Ig strand A' 321..326 CDD:409446 0/9 (0%)
Ig strand B 329..339 CDD:409446 0/9 (0%)
Ig strand C 343..350 CDD:409446 1/6 (17%)
Ig strand C' 352..355 CDD:409446 1/2 (50%)
Ig strand D 358..363 CDD:409446 0/4 (0%)
Ig strand E 371..380 CDD:409446 1/8 (13%)
Ig strand F 387..395 CDD:409446 0/7 (0%)
Ig strand G 398..409 CDD:409446 0/10 (0%)
PTKc_Kit 549..918 CDD:270682 137/457 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.