DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and flt4

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_571020.2 Gene:flt4 / 30121 ZFINID:ZDB-GENE-980526-326 Length:1368 Species:Danio rerio


Alignment Length:488 Identity:144/488 - (29%)
Similarity:223/488 - (45%) Gaps:130/488 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 SSSPITIFSLKSGT-IPIVVTVGGFFVAI---AVLLAYLCRRRLCAISRTLKKTKEKEELAKKSN 362
            ||:.:::......| :.||:.:|...:||   .:||...|.                   .|:.|
Zfish   780 SSATVSVIGSDDKTNVEIVILIGTGVIAIFFWVLLLVIFCN-------------------VKRVN 825

  Fly   363 QSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPG 427
            .:.:.:...     |::|...:.|:.....|:|::..|                           
Zfish   826 PADIKTGYL-----SIIMDPGEVPLEEQCEYLPYDSSQ--------------------------- 858

  Fly   428 TGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNI 492
                                               ||..|.||:...:||.||||:|........
Zfish   859 -----------------------------------WEISRDRLRLGKVLGHGAFGKVIEASIFGH 888

  Fly   493 NGNEGITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKD-PTFVILEYVNR 556
            :......|||||.|||.||..:.|.|:|||:::..:..|:|||:|||.||..: |..||:||...
Zfish   889 DKKSSANTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEYCKY 953

  Fly   557 GKLQTYLRSSR---------------------------AERHYGNTHGKS-----------NVLT 583
            |.|..:||:.|                           ...|..:|...:           ..||
Zfish   954 GNLSNFLRAKREFFLPYRDRSPKTQSQVRRMIEAGQASQSEHQPSTSSTNPPRVTVDDLWKTPLT 1018

  Fly   584 SCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGK 648
            ..||..:.:|||:||::|.||..|||||||||||:::::..|:.|||.|||:.....|.||...:
Zfish  1019 IEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGNAR 1083

  Fly   649 LPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISA-ADVMRKVRDGYRLEKPEHC 712
            ||::|||.||::|.:::.:||:||||:|:|||.:||::|||||.. .|..::::||.|:..|::.
Zfish  1084 LPLKWMAPESIFDKVYTSQSDVWSFGVLLWEIFSLGASPYPGIQIDEDFCKRLKDGTRMRAPDNA 1148

  Fly   713 RRELYNIMYYCWSHDPQERPLFAEIIQMLDKLL 745
            ..|:|.||..||..:|:|||.|..::::|..||
Zfish  1149 SPEIYGIMLACWQGEPRERPTFPALVEILGDLL 1181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 118/310 (38%)
PTKc 474..742 CDD:270623 117/307 (38%)
flt4NP_571020.2 IG_like 258..348 CDD:214653
Ig1_VEGFR 265..350 CDD:143270
IG_like 362..445 CDD:214653
Ig 373..445 CDD:299845
Ig 602..685 CDD:143165
IG 602..678 CDD:214652
I-set 705..786 CDD:254352 2/5 (40%)
IGc2 714..776 CDD:197706
PKc_like 858..1184 CDD:304357 126/386 (33%)
Pkinase_Tyr 866..1177 CDD:285015 118/310 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 978..1007 2/28 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1190..1212
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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