DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and Styk1

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_766479.1 Gene:Styk1 / 243659 MGIID:2141396 Length:429 Species:Mus musculus


Alignment Length:463 Identity:115/463 - (24%)
Similarity:195/463 - (42%) Gaps:78/463 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 IPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVM 380
            :|.:: ||||.:.:|::|....|                      ..:||               
Mouse    33 VPALL-VGGFLILLAIILWLFIR----------------------GQRSQ--------------- 59

  Fly   381 QQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAG 445
            :|..||...|:  ||..|.:....|                     |.||  ..|.|...|...|
Mouse    60 RQSPGPRGTAS--VPASRGRSQEAA---------------------GHGE--KVLLPLKETSVEG 99

  Fly   446 SSGAPENAFAGEANCDRWEFPRYR-LKFFNILGEGAFGQVWRCEATNINGNEGITTVAVKTLKES 509
            ...|.....|      :.:.||.: |:....:..|:.|.::....|. ..:....:|.:|.|::.
Mouse   100 FLRAATPRLA------KLQVPREQLLEVLEQIHSGSCGTLYHATMTT-KDHPKPKSVVLKALEDP 157

  Fly   510 ATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGN 574
            ....:.:|.:..::..:.|..|.|:|.|.||||::.|.:::||.|..|.|.::|.:.|  |....
Mouse   158 VGLQEVQDFIGRIQFYQYLGKHKNLVQLEGCCTERLPLYMMLEDVVPGDLLSFLWTCR--RDVMT 220

  Fly   575 THGKSNVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSK 639
            ..|....||...:.....|:...:::|..:.:.|.|:|||||||..|.|.|:...|.|.:|....
Mouse   221 MDGLLYDLTEKQIYHIGKQILLALEFLQEKHLFHGDVAARNILIQSDLTPKLCHLGLAYEVHAHG 285

  Fly   640 IYERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGY 704
            .........:|::|:|.|.|.....|::.||||||||::|:||||:.|||.:....:::.::...
Mouse   286 AISSARSSTIPLKWLAPERLLLRPASIRGDIWSFGILLYEMVTLGAPPYPEVPPTSILQYLQRKK 350

  Fly   705 RLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKLLHTEMDYIELERFPD----HNYYNI 765
            .:::|..|...:||||..||......|||..:::|.|:....:..|...|: .|:    ..|.::
Mouse   351 IMKRPSSCSHAMYNIMKCCWRWSEDSRPLLGQLLQRLEAASRSADDKAVLQ-VPELVVPELYADV 414

  Fly   766 VSLSGEKL 773
            ..:..|.:
Mouse   415 AGIRAESI 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 80/270 (30%)
PTKc 474..742 CDD:270623 79/267 (30%)
Styk1NP_766479.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..83 10/62 (16%)
PKc_like 123..388 CDD:389743 79/267 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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