DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and old-2

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_496123.1 Gene:old-2 / 191738 WormBaseID:WBGene00003863 Length:498 Species:Caenorhabditis elegans


Alignment Length:469 Identity:132/469 - (28%)
Similarity:210/469 - (44%) Gaps:79/469 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 IVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQ 382
            |.:::...|||:|:   .:|    |.|.....|.::......|.|:..|..|..|..:.      
 Worm    55 IFISLYSVFVALAI---GIC----CLIKAYKSKKRQLPANRSKGNEYLLEPTTADQKKR------ 106

  Fly   383 WQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSS 447
                  ::|..||.| .....|.:.:...|.|...:|:...|      |...|            
 Worm   107 ------YSNNIVPPE-PTPYPITSGEDDFGKTPSRLSNEECP------PELKL------------ 146

  Fly   448 GAPENAFAGEANCDRWEFPRYRLKF------FNI-----LGEGAFGQV----WRCEATNINGNEG 497
             ||.|        ||.::..|..:.      .:|     ||.|.||.:    .|.:.:.....|.
 Worm   147 -APIN--------DRIKYLHYYAEVEINEEDLDISKGRPLGSGEFGIIRKGFLRSKNSKNKETES 202

  Fly   498 ITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTY 562
            ...||||:.......:.::.:..||:||.::..|.|::.|:|..|..:...:|.|.|..|.|.::
 Worm   203 RLEVAVKSPLNEYNHIQQELIYDELKVMCAVGKHPNILALVGGITIGEKRMIISELVENGDLLSF 267

  Fly   563 LRSSRAERHYG----NTHGKSNVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHT 623
            ||.:|  |::.    ....:...|...||.||.:|:||||:||.....:|||||.||:||..:..
 Worm   268 LRKNR--RNFTIDQLAFEPEKPSLGLVDLVSFAFQIAKGMEYLIHVPCVHRDLALRNVLIKGNMV 330

  Fly   624 CKVADFGFARDVITSKIYERKS-EGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTP 687
            .::||||.||.......|:.:| :..|||.|||.||:...:|:.|||:||:|:.::|:.:||.:|
 Worm   331 IRIADFGLARRHKNKDYYKTQSVDTPLPIHWMAPESIDKLLFTQKSDVWSYGVCLYELFSLGKSP 395

  Fly   688 YPGISAAD--------VMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKL 744
            |..:...|        |:..:.:|.||.:|.|...|:||:|..||..|...|..|.:.|:..:|.
 Worm   396 YKNVIKYDERDSYCKYVLAYLNEGKRLAQPAHADAEIYNVMKLCWDLDMNSRTTFLDCIEFFEKE 460

  Fly   745 LHTEMD--YIELER 756
            |.|..:  :::|.|
 Worm   461 LKTTSNEYFLDLTR 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 96/298 (32%)
PTKc 474..742 CDD:270623 96/289 (33%)
old-2NP_496123.1 PTKc 175..458 CDD:270623 95/284 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157451
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.