DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and Y38H6C.20

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_507962.2 Gene:Y38H6C.20 / 189700 WormBaseID:WBGene00012632 Length:736 Species:Caenorhabditis elegans


Alignment Length:334 Identity:94/334 - (28%)
Similarity:145/334 - (43%) Gaps:51/334 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 CLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFN--ILGEGAFGQV--------WRCEATNIN 493
            |.||........|:        |::......|..|.  |:|:|.||.|        |..... ::
 Worm   362 CATGRWCKGNTQES--------DQFLMDENSLTIFEDIIIGKGRFGTVHLGQLSSDWHGPVV-LD 417

  Fly   494 GNEGITTVAVKT---LKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVN 555
            ..:   .|||||   |.:|.    :.|...|:|..|.:..|..|:.|:|..........::||.:
 Worm   418 DQQ---RVAVKTNRYLDKSR----KSDFFDEIEGAKEVGRHSRVLSLIGTVVKNGNVLHVMEYCS 475

  Fly   556 RGKLQTYLRSSRAERHYGNTHGK----------------SNVLTSCDLTSFMYQVAKGMDYLTSR 604
            .|.|..||...|  |:.....||                ..|::..||.....|:...|.:|.|:
 Worm   476 NGNLLDYLIGKR--RYMVELQGKGVNLNESLPSLNDIDFDEVISIHDLYRIASQICTAMMFLGSK 538

  Fly   605 GIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSD 669
            .|:|..|.||:::|:.||..|:||||......|......:::.|    |.|.|.|.....:..||
 Worm   539 SIVHNALCARHVMISSDHNVKLADFGSISTPTTPNCTPVENQYK----WCALELLRGETATCLSD 599

  Fly   670 IWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLF 734
            :||||:::|||.|:|..||..:....:...|..|:||:||:.|..::|.:|...|...|.:||.|
 Worm   600 VWSFGVVLWEIFTMGGCPYYNVPDVGIRGLVEKGFRLQKPDGCNIQIYQLMRETWLDSPTDRPTF 664

  Fly   735 AEIIQMLDK 743
            ::|.|.:.:
 Worm   665 SQISQRISQ 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 89/299 (30%)
PTKc 474..742 CDD:270623 87/296 (29%)
Y38H6C.20NP_507962.2 PKc_like 392..671 CDD:389743 87/292 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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