DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and F09A5.2

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001360730.1 Gene:F09A5.2 / 181440 WormBaseID:WBGene00008599 Length:867 Species:Caenorhabditis elegans


Alignment Length:540 Identity:146/540 - (27%)
Similarity:227/540 - (42%) Gaps:131/540 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 ANNSTRVESAIPAETTTPSGGHHNNSSSPITIFSLKSGTIPIVVTVGGFFVAIAVLLAYLC---- 337
            :.|....|..||  .:.|||...:        |:.....:.:::.:....:.|..:..::|    
 Worm   326 SENPNEFEICIP--DSQPSGKKED--------FNWHVTELLLIIGIPCISLTICCIAFFVCCLKC 380

  Fly   338 ------RRRLCAISRTLKKTKEKEELAKK--SNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYV 394
                  ..|:...|....:..::.||.|:  ..:.:.:..:.:.|...:..|:| ...|.||.|:
 Worm   381 AKLKMAMMRMNVFSNDTHQNPDEMELKKRWIGMRKKFNKDVENGSCKELNTQKW-SHFASANNYM 444

  Fly   395 PWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEAN 459
                |.|                                                   |.|....
 Worm   445 ----DIQ---------------------------------------------------ALANANK 454

  Fly   460 CDRWEFPRYRL--KFFNILGEGAFGQVWR---------------CEATNINGNEGITTVAVKTLK 507
            .|.||.....|  :..::||.|||..|::               ...|..:.|.|....|:|.|.
 Worm   455 KDIWEIDTKNLLVQEDHLLGNGAFANVYKGIVKGKIPLLVVNNSLNMTVESENNGHYEAAIKKLP 519

  Fly   508 ESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHY 572
            ..|.|.:..|...|::.||.|..|.:|:.:|||.::.....:::||..||.|..:||     || 
 Worm   520 AHADEQNHLDFFHEIDFMKRLGHHPHVISMLGCVSNPYEPLIVVEYCARGDLLKFLR-----RH- 578

  Fly   573 GNTHGKSNVLTS-----------C----DLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDH 622
                 |..||.:           |    ||.|..:|||.||.||.|:..|||||||||||:|...
 Worm   579 -----KDYVLMNKTDDCPIEADMCLRIKDLVSIAWQVADGMSYLASKNFIHRDLAARNILLTKSL 638

  Fly   623 TCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTP 687
            |.||:|||..| .:.|.:|..|. |:|||:||:.|:|....||.|:|:||||:|::||.::|..|
 Worm   639 TAKVSDFGLCR-YMDSALYTAKG-GRLPIKWMSVEALKLYEFSTKTDVWSFGVLLFEIFSMGDVP 701

  Fly   688 YPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKLLHTEMDYI 752
            ||.|...|::..:..|.||.:|..|..|::|||..||:..|::||.|.|:...:..:|:.:.:  
 Worm   702 YPTIQQVDMLEHLLAGGRLSQPLKCPNEIFNIMQKCWAEKPEDRPEFNEMRGEITVMLNLDDE-- 764

  Fly   753 ELERFPDHNYYNIVSLSGEK 772
                  .:.|.::.|..|.|
 Worm   765 ------SYGYLSVESQGGPK 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 112/302 (37%)
PTKc 474..742 CDD:270623 111/297 (37%)
F09A5.2NP_001360730.1 PTKc 473..752 CDD:270623 111/291 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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