DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and ver-3

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_509836.1 Gene:ver-3 / 181289 WormBaseID:WBGene00006896 Length:1227 Species:Caenorhabditis elegans


Alignment Length:771 Identity:175/771 - (22%)
Similarity:286/771 - (37%) Gaps:261/771 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 DGDDLIFGIEPRFSLPGGENDASPPEKIPFQIDRETGVVTLNESLAGRAGQNFLIYITVT-DGSY 148
            |.||  :.:..||......:.:|.|.....:|.:.:..:.||           |..:|.: .|:|
 Worm   597 DSDD--WSVSWRFENSKSSDISSIPTTTETEIKQYSKHLILN-----------LRDVTTSFTGTY 648

  Fly   149 T--AKNEVFINILGERENSSGYRPQTSI--------------SNVVHNISQFLPRFDQLPGVQSI 197
            |  .|||....:|           :|||              ||.|     .:..:||...:...
 Worm   649 TCVVKNEDSEKLL-----------ETSIDVKAISKPSITGGNSNAV-----VIVDYDQYFEINCN 697

  Fly   198 RNGLPNSRPGGWYPPVPQNNIFGPPPFGNNYPPPPPNIPGVRGEQSGEEEQPDEEVTPTTPVRIS 262
            ..|.|        |||.|....|.|....:.......:...|||..||..              .
 Worm   698 MTGTP--------PPVYQWFKDGNPYTHGDVDGSILRVSRARGEDDGEFH--------------C 740

  Fly   263 STTPKSRTKLTPITANNSTRVESAIPAETTTPSGGHHNNSSSPITIFSLKSGTIPIVVTVGGFFV 327
            ..|.::..||      ||..|:.              ||:......|.              :|:
 Worm   741 LATNRAGDKL------NSIEVQV--------------NNAPKGSLFFY--------------WFL 771

  Fly   328 AIAVLLAYLCRRRL-CAISRTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFAN 391
            |:.:|::.:....| |.:..:.:.||:| ::|..:    |..|:.......:..:....||....
 Worm   772 ALLLLISIIAVFLLTCKLRASNRLTKQK-DIALNT----LYETMIKHQAGPLPEEMKDLPVEERT 831

  Fly   392 RYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAG 456
            .|:|:..|                                                         
 Worm   832 YYLPYNND--------------------------------------------------------- 839

  Fly   457 EANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVAV-KTLKESATEVD------ 514
                  :|.....|:..|.:|.|.||.|          .:|:..:|. |:..||.|.:.      
 Worm   840 ------YEIDPVNLEILNPIGSGHFGVV----------KKGLLGMAYPKSKIESKTRLPVAVKSS 888

  Fly   515 --------RKDLLSELEVMKSLEPHINVVHLLGCCTD---KDPTFVILEYVNRGKLQTYLRSSR- 567
                    :|.:..||:||.::..:.||:.|:|..|.   :...:::.|:::.|.|:.:|::.| 
 Worm   889 TNPFNVELQKMMAEELKVMCAIPKNPNVLALIGAVTKNMRQGQLYIVTEFIDGGNLREFLQAHRN 953

  Fly   568 -------AERH-------------------YGNTHGKS--------NVLTSCDLTSFMYQVAKGM 598
                   .:.|                   :....|:.        :.|.:.||.|...|:||||
 Worm   954 TFINELVEDEHVPVDDSYLVPNSVKKKIYKFDEKLGEGTRLLVEDPDALCTSDLLSIGLQIAKGM 1018

  Fly   599 DYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGK---LPIRWMATESLY 660
            .:|.....:|||||.||:|||.....::||||.::. .|:|.|.|..:.|   ||:|||..|.:.
 Worm  1019 AWLADVPCVHRDLACRNVLITKTKIVRIADFGLSKK-HTNKTYYRTKKSKDTPLPVRWMPLECIE 1082

  Fly   661 DNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWS 725
            :..|:.|||:|||||.::||.|||.||||.....:|:..:|:|.|.::||:|..|:|.:|..||.
 Worm  1083 EFKFTQKSDVWSFGICLYEIFTLGGTPYPNCDTFNVIEFIRNGNRNKQPEYCHDEIYELMKVCWQ 1147

  Fly   726 HDPQERPLF---------------AEIIQMLDKLLHTEM-------DYIELERFPD 759
            .:|::||.|               ::.::.::.:|||||       |:|:..| ||
 Worm  1148 FNPKDRPTFNDCITFFENHMRDSSSQFLERVENMLHTEMQEQSKLDDWIQDSR-PD 1202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 19/81 (23%)
STYKc 470..741 CDD:214568 99/341 (29%)
PTKc 474..742 CDD:270623 98/338 (29%)
ver-3NP_509836.1 IG 242..>313 CDD:214652
IG_like 578..667 CDD:214653 22/93 (24%)
Ig_3 578..654 CDD:290638 15/69 (22%)
I-set 673..757 CDD:254352 24/116 (21%)
IGc2 692..747 CDD:197706 14/76 (18%)
STYKc 847..1163 CDD:214568 99/326 (30%)
PTKc 851..1164 CDD:270623 98/323 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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