DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and kin-16

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_496017.1 Gene:kin-16 / 174499 WormBaseID:WBGene00002200 Length:495 Species:Caenorhabditis elegans


Alignment Length:543 Identity:141/543 - (25%)
Similarity:224/543 - (41%) Gaps:159/543 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 TRVESAIPAETTTPSGGHHNNSSSPITIFSLKSGTIPIVVTVGGFFVAIAVLLAYLCRRRLCAIS 345
            ||.|...|||...             ::|.|::   .:...|.|..|.:| .:|:|..|      
 Worm    41 TRSERGDPAEKEG-------------SVFKLRT---TVFFVVYGLLVLLA-FIAFLVWR------ 82

  Fly   346 RTLKKTKEKEELAKKSNQSQLSSTLTD--DSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQ 408
              |:::|.:|   |:.|.: |.:..:|  |:.::|..:....|:.....|:|:::  |..||:..
 Worm    83 --LRRSKTQE---KRKNMA-LMNIYSDLRDTGDAMPEELKNRPLNDKLDYLPYKK--QYEIASEN 139

  Fly   409 LSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFF 473
            |                                         ||.                    
 Worm   140 L-----------------------------------------ENK-------------------- 143

  Fly   474 NILGEGAFGQVWR-----CEATNINGNEGITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHIN 533
            :|||.|.||.|.:     ....|....:...|||||:............|.:||.:|.|:....|
 Worm   144 SILGSGNFGVVRKGILKMASPKNEEEKKMRLTVAVKSAANCYDISQTSMLAAELRLMCSIGRFPN 208

  Fly   534 VVHLLGCCTD---KDPTFVILEYVNRGKLQTYLRSSR----------------------AERH-- 571
            |:.|:|..|.   |....::.||::.|.::.||...|                      |:|.  
 Worm   209 VLALVGAVTSELRKGRLLIVTEYIDCGDIRKYLIDHRNVFQDHLIEDKTEPDSYLTPISAKRKNY 273

  Fly   572 -YGNTHGKSNV--------LTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVA 627
             :.||...|:.        ||:.||.||..|:|.||.||.|..::|||||.||:|:..:.|.::|
 Worm   274 VFKNTDENSDYVIKESLDSLTTSDLLSFGLQIANGMQYLASIPMVHRDLALRNVLLKKNKTIRIA 338

  Fly   628 DFGFARDVITSKIY--ERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPG 690
            |||.||.......|  ::..:..:|:|||:.|:.....|:.|||:|||||.::||.|||..|||.
 Worm   339 DFGMARTHENKSYYIPQKTKDAPVPVRWMSPEAFDTMKFTEKSDVWSFGICLYEIFTLGQLPYPD 403

  Fly   691 ISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLF---------------AEIIQM 740
            :.:..:...:..|.|..:|:||..|||::|..||...|:.||.|               :::::.
 Worm   404 VPSERIYEYMHSGRRCPQPQHCHVELYDLMKLCWHEKPELRPNFSNCVEYFIGHMKKSASKLLEN 468

  Fly   741 LDKLLHTEM-------DYIELER 756
            :|::|..|.       |:|.:||
 Worm   469 VDEMLRVEAENQRKLEDWIRVER 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 101/328 (31%)
PTKc 474..742 CDD:270623 101/325 (31%)
kin-16NP_496017.1 STYKc 140..454 CDD:214568 104/374 (28%)
PTKc 145..454 CDD:270623 101/308 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4350
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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