DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad96Ca and W04G5.10

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_492969.2 Gene:W04G5.10 / 173049 WormBaseID:WBGene00012270 Length:412 Species:Caenorhabditis elegans


Alignment Length:423 Identity:123/423 - (29%)
Similarity:184/423 - (43%) Gaps:83/423 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 FVAIAVLLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFA 390
            |:|:::.|.|:.||                 :...|:.|.|..:..|..|:.:...     :..:
 Worm    19 FLALSLFLLYIWRR-----------------ILTNSSNSDLGGSEEDVERSLLTTS-----LPIS 61

  Fly   391 NRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFA 455
            |:|   :.|:......|:|.:.....                       |.|.......|||   
 Worm    62 NKY---DLDRTRIQTESELISETIKS-----------------------LIGDNHLEIDPEN--- 97

  Fly   456 GEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVAVKTLKESATEVDRKDLLS 520
                        .::...|.:|.|.||.|:|.|......|.....||||..........:|.|..
 Worm    98 ------------LKISTENYIGSGFFGTVYRAELRRERRNSNFMIVAVKEPSNIHNIRQKKILHE 150

  Fly   521 ELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGNTHGKSNVLTSC 585
            ||.||.|:|.|.|::.|:|..|.:: ..::.|||..|.|..:||..:.::.......||  |...
 Worm   151 ELNVMCSMEKHPNILSLVGVVTQRN-VMIVTEYVEDGDLLKFLRKCKFDKDSVKLDEKS--LCKA 212

  Fly   586 DLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERK-SEGKL 649
            ||.||.:|:|.||.||.....:|||||.||:||.::...|:||||.||.......|..| ::..|
 Worm   213 DLFSFTFQIANGMQYLERVPCVHRDLALRNVLIKNNGVLKIADFGLARRHDKKDYYRTKTTDTAL 277

  Fly   650 PIRWMATESLYDN----IFSVKSDIWSFGILMWEIVTLGSTPYPGISA---------ADVMRKVR 701
            ||:|:|.|...:.    .|..|||:||:|:.::||.:||.:||..:.:         ||.:||  
 Worm   278 PIKWLAPECFEEEEEKIRFDSKSDVWSYGVCLYEIFSLGESPYNELDSNNFAFLQVLADFLRK-- 340

  Fly   702 DGYRLEKPEHCRRELYNIMYYCWSHDPQERPLF 734
             |..|.:||||..::|..|..||:..|:|||.|
 Worm   341 -GNTLSEPEHCAPKMYYFMKSCWNLIPEERPSF 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 102/279 (37%)
PTKc 474..742 CDD:270623 102/275 (37%)
W04G5.10NP_492969.2 PTKc 104..378 CDD:270623 102/275 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157448
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.