DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and Ltk

DIOPT Version :10

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_976220.2 Gene:Ltk / 17005 MGIID:96840 Length:888 Species:Mus musculus


Alignment Length:464 Identity:125/464 - (26%)
Similarity:192/464 - (41%) Gaps:96/464 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 AETTTPSGGHHNNSSSPITIFSLKSGTIPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKKTKE 353
            ||.|.|.|  ...:...:|...|.:...|::: :|....|:|:.|..:|...:            
Mouse   395 AECTCPEG--TELAVDNVTCMDLPTTASPLIL-MGAVVAALALSLLMMCAVLI------------ 444

  Fly   354 KEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGV 418
                                    :|.|:.||         .|                      
Mouse   445 ------------------------LVNQKCQG---------LW---------------------- 454

  Fly   419 SSPGVPSPGTGEPGSNLGPGCLTGGA-GSSGAPENAFAGEANCDRWEFP-------RYRLKFFNI 475
                    ||..||..|....|...| .::..|.....|.:....|..|       ...:.....
Mouse   455 --------GTRLPGPELELSKLRSSAIRTAPNPYYCQVGLSPAQPWPLPPGLTEVSPANVTLLRA 511

  Fly   476 LGEGAFGQVWRCEATNINGNEGITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGC 540
            ||.||||:|:....|.:.|:.....||:|||.|..:..|..|.|.|..::.... |.|:|..:|.
Mouse   512 LGHGAFGEVYEGLVTGLPGDSSPLPVAIKTLPELCSHQDELDFLMEALIISKFS-HQNIVRCVGL 575

  Fly   541 CTDKDPTFVILEYVNRGKLQTYLRSSRAERHYGNTHGKSNVLTSCDLTSFMYQVAKGMDYLTSRG 605
            .....|..::||.::.|.::::||.||..      .|:...||..||......:|:|..||....
Mouse   576 SFRSAPRLILLELMSGGDMKSFLRHSRPH------PGQLAPLTMQDLLQLAQDIAQGCHYLEENH 634

  Fly   606 IIHRDLAARNILIT---DDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVK 667
            .||||:||||.|::   .....|:.|||.|||:..:..|.:.....||::||..|:|.:.:|:.|
Mouse   635 FIHRDIAARNCLLSCSGASRVAKIGDFGMARDIYQASYYRKGGRTLLPVKWMPPEALLEGLFTSK 699

  Fly   668 SDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERP 732
            :|.||||:|:|||.:||..||||.:..:|:..:..|.|::.|.:|...:|.||..||.|.|:.||
Mouse   700 TDSWSFGVLLWEIFSLGYMPYPGHTNQEVLDFIATGNRMDPPRNCPGPVYRIMTQCWQHQPELRP 764

  Fly   733 LFAEIIQML 741
            .|..|::.:
Mouse   765 DFGSILERI 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
PTKc 474..742 CDD:270623 96/271 (35%)
LtkNP_976220.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..294
PTKc_ALK_LTK 499..775 CDD:270632 96/282 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 857..888
Blue background indicates that the domain is not in the aligned region.

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