DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and Fgfr3

DIOPT Version :10

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001156689.1 Gene:Fgfr3 / 14184 MGIID:95524 Length:802 Species:Mus musculus


Alignment Length:799 Identity:230/799 - (28%)
Similarity:352/799 - (44%) Gaps:179/799 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VYHHHNHESRIIHCRKQLTSWRRRSLLLTIIVVTATVVSLISQEAE--AHNQNAPPILYVRERNW 64
            |.:..:.::.:..|:.:||   ||.|....:.||....|...::.|  |.:..||        .|
Mouse    94 VLNASHEDAGVYSCQHRLT---RRVLCHFSVRVTDAPSSGDDEDGEDVAEDTGAP--------YW 147

  Fly    65 RISETEKVGQIIDRVRAEDPDGDDLIFGIEPRFSLPGGENDASPPEKI-------PFQIDRETGV 122
              :..|::.:.:..|.|.:          ..||..|...|   |...|       .|:.:...|.
Mouse   148 --TRPERMDKKLLAVPAAN----------TVRFRCPAAGN---PTPSISWLKNGKEFRGEHRIGG 197

  Fly   123 VTLNESLAGRAGQNFLIYITVTD---GSYTAKNEVFINILGERENSSGYRPQTSISNVVHNISQF 184
            :.|      |..|..|:..:|..   |:||.          ..||..|...||...:|       
Mouse   198 IKL------RHQQWSLVMESVVPSDRGNYTC----------VVENKFGSIRQTYTLDV------- 239

  Fly   185 LPRFDQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFGPPP--FGNNYPPPPPNIPGVRG-EQSGEE 246
            |.|....|.:|:   |||.:          |..|.|...  ....|....|:|..::. |.:|.:
Mouse   240 LERSPHRPILQA---GLPAN----------QTAILGSDVEFHCKVYSDAQPHIQWLKHVEVNGSK 291

  Fly   247 EQPD-------------EEVTPTTPVRISSTTPKSRTKLTPITANNSTRVESAIPAETTTPSGGH 298
            ..||             |.|.....:|:::.:.:...:......|.....|.|.......|....
Mouse   292 VGPDGTPYVTVLKSWISENVEADARLRLANVSERDGGEYLCRATNFIGVAEKAFWLRVHGPQAAE 356

  Fly   299 HNNSSSPITIFSLKSGTIPIVVTVGG--FFVAIAVLLA-YLCRRRLCAI----SRTLKKTKE--- 353
            .....:.      ::|::...|...|  ||:.|.|:.| .|||.|....    |.|:.|...   
Mouse   357 EELMETD------EAGSVYAGVLSYGVVFFLFILVVAAVILCRLRSPPKKGLGSPTVHKVSRFPL 415

  Fly   354 KEELAKKSNQSQLSST-LTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGG 417
            |.:::.:||.|..|:| |...:|    :...:||| .||                          
Mouse   416 KRQVSLESNSSMNSNTPLVRIAR----LSSGEGPV-LAN-------------------------- 449

  Fly   418 VSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGEGAFG 482
            ||...:|:    :|                              :||..|.||.....||||.||
Mouse   450 VSELELPA----DP------------------------------KWELSRTRLTLGKPLGEGCFG 480

  Fly   483 QVWRCEATNINGNEGI--TTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKD 545
            ||...||..|:.:...  .|||||.||:.||:.|..||:||:|:||.:..|.|:::|||.||...
Mouse   481 QVVMAEAIGIDKDRTAKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQGG 545

  Fly   546 PTFVILEYVNRGKLQTYLRSSR---AERHYGNTHGKSNVLTSCDLTSFMYQVAKGMDYLTSRGII 607
            |.:|::||..:|.|:.:||:.|   .:..:.........||..||.|..||||:||:||.|:..|
Mouse   546 PLYVLVEYAAKGNLREFLRARRPPGMDYSFDACRLPEEQLTCKDLVSCAYQVARGMEYLASQKCI 610

  Fly   608 HRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDIWS 672
            ||||||||:|:|:|:..|:||||.||||.....|::.:.|:||::|||.|:|:|.:::.:||:||
Mouse   611 HRDLAARNVLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 675

  Fly   673 FGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEI 737
            ||:|:|||.|||.:|||||...::.:.:::|:|::||..|..:||.||..||...|.:||.|.::
Mouse   676 FGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPASCTHDLYMIMRECWHAVPSQRPTFKQL 740

  Fly   738 IQMLDKLLH-TEMD-YIEL 754
            ::.||::|. |..| |::|
Mouse   741 VEDLDRILTVTSTDEYLDL 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 19/108 (18%)
PTKc 474..742 CDD:270623 122/272 (45%)
Fgfr3NP_001156689.1 ig 46..110 CDD:395002 2/15 (13%)
Ig strand B 55..59 CDD:409353
Ig strand C 69..73 CDD:409353
Ig strand E 91..94 CDD:409353 230/799 (29%)
Ig strand F 104..108 CDD:409353 0/3 (0%)
IgI_2_FGFR 145..239 CDD:409443 26/132 (20%)
Ig strand A 145..148 CDD:409443 2/12 (17%)
Ig strand A' 156..161 CDD:409443 0/4 (0%)
Ig strand B 165..173 CDD:409443 3/7 (43%)
Ig strand C 179..184 CDD:409443 1/4 (25%)
Ig strand C' 187..189 CDD:409443 0/1 (0%)
Ig strand D 198..201 CDD:409443 1/8 (13%)
Ig strand E 205..210 CDD:409443 1/4 (25%)
Ig strand F 219..226 CDD:409443 2/16 (13%)
Ig strand G 229..239 CDD:409443 3/9 (33%)
IgI_3_FGFR 247..347 CDD:409363 21/112 (19%)
Ig strand A 247..250 CDD:409363 1/2 (50%)
Ig strand A' 254..258 CDD:409363 1/13 (8%)
Ig strand B 266..273 CDD:409363 0/6 (0%)
Ig strand C 277..284 CDD:409363 2/6 (33%)
Ig strand D 299..304 CDD:409363 0/4 (0%)
Ig strand E 315..320 CDD:409363 1/4 (25%)
Ig strand F 328..336 CDD:409363 0/7 (0%)
Ig strand G 339..347 CDD:409363 2/7 (29%)
PTKc_FGFR3 455..788 CDD:173652 136/339 (40%)
Blue background indicates that the domain is not in the aligned region.

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