DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and Csf1r

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001032948.2 Gene:Csf1r / 12978 MGIID:1339758 Length:977 Species:Mus musculus


Alignment Length:780 Identity:207/780 - (26%)
Similarity:298/780 - (38%) Gaps:261/780 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 GDDLIFGIEPRFSLPGGENDASP----------------PEKIPF----QIDRETGVVTLNESLA 130
            ||.||..:..         ||.|                ..|:.|    .|.|.|..:.||...|
Mouse   316 GDSLILTVHA---------DAYPSIQHYNWTYLGPFFEDQRKLEFITQRAIYRYTFKLFLNRVKA 371

  Fly   131 GRAGQNFLIYITVTDGSYTAKNEVFINILGERENSSGYRPQTSISNVVHNISQFLPRFDQLPGVQ 195
            ..|||.||:          |:|:...|.| ..|.:..|.|:.|::                    
Mouse   372 SEAGQYFLM----------AQNKAGWNNL-TFELTLRYPPEVSVT-------------------- 405

  Fly   196 SIRNGLPNSRPGGWYPPVPQNNIFGPPPFGNNYPPPPPNIPGVRGEQSGEEEQPDEEVTPTTPVR 260
                         |.|....:.:|...   :.||.|.......||.....:|....:|...|...
Mouse   406 -------------WMPVNGSDVLFCDV---SGYPQPSVTWMECRGHTDRCDEAQALQVWNDTHPE 454

  Fly   261 ISSTTPKSRTKLTPITANNSTRVESAIPAETTTPSGGH----HN---NSSSPITIFSL------- 311
            :.|..|..:           ..::|.:|..|...:..:    ||   |||......||       
Mouse   455 VLSQKPFDK-----------VIIQSQLPIGTLKHNMTYFCKTHNSVGNSSQYFRAVSLGQSKQLP 508

  Fly   312 -KSGTIPIVV---TVGGFFVAIAVLLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTLTD 372
             :|...|:||   :|....|.:.:||.|            ..|.|.|.::..|            
Mouse   509 DESLFTPVVVACMSVMSLLVLLLLLLLY------------KYKQKPKYQVRWK------------ 549

  Fly   373 DSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGP 437
                  ::::::|     |.|.        .|..:||                            
Mouse   550 ------IIERYEG-----NSYT--------FIDPTQL---------------------------- 567

  Fly   438 GCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVA 502
                        |.|        ::|||||..|:|...||.||||:|....|..:...:.:..||
Mouse   568 ------------PYN--------EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 612

  Fly   503 VKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLR--- 564
            ||.||.:|...:::.|:|||::|..|..|.|:|:|||.||...|..||.||...|.|..:||   
Mouse   613 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 677

  Fly   565 ------------SSRAERHYGNTH----------GKSN-----------VLTSC----------- 585
                        .|..:..|.|.|          |.|:           |.||.           
Mouse   678 EAMLGPSLSPGQDSEGDSSYKNIHLEKKYVRRDSGFSSQGVDTYVEMRPVSTSSSDSFFKQDLDK 742

  Fly   586 ---------DLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIY 641
                     ||..|..|||:||.:|.|:..||||:||||:|:|..|..|:.|||.|||::....|
Mouse   743 EASRPLELWDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTSGHVAKIGDFGLARDIMNDSNY 807

  Fly   642 ERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRK-VRDGYR 705
            ..|...:||::|||.||::|.:::|:||:||:|||:|||.:||..|||||...:...| |:|||:
Mouse   808 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNNKFYKLVKDGYQ 872

  Fly   706 LEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKLLHTEMDYIELERFPDHNYYNIVSLSG 770
            :.:|....:.:|:||..||..:|..||.|.:|..:|       .:...||| .|.:|.|:.|..|
Mouse   873 MAQPVFAPKNIYSIMQSCWDLEPTRRPTFQQICFLL-------QEQARLER-RDQDYANLPSSGG 929

  Fly   771  770
            Mouse   930  929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 24/97 (25%)
STYKc 470..741 CDD:214568 121/327 (37%)
PTKc 474..742 CDD:270623 119/324 (37%)
Csf1rNP_001032948.2 ig 25..85 CDD:278476
IG_like 28..101 CDD:214653
IG_like 113..195 CDD:214653
Ig 113..179 CDD:299845
ig 207..293 CDD:278476
IG_like 209..295 CDD:214653
Ig4_SCFR_like 299..398 CDD:143176 25/101 (25%)
IG_like 311..395 CDD:214653 25/98 (26%)
Regulatory juxtamembrane domain. /evidence=ECO:0000250 540..572 11/110 (10%)
PTKc_CSF-1R 541..913 CDD:133237 138/457 (30%)
Pkinase_Tyr 580..904 CDD:285015 120/323 (37%)
Activation loop. /evidence=ECO:0000250 794..816 8/21 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 921..957 4/9 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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