DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad96Ca and fgfr4

DIOPT Version :9

Sequence 1:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_571505.1 Gene:fgfr4 / 100000160 ZFINID:ZDB-GENE-980526-488 Length:922 Species:Danio rerio


Alignment Length:764 Identity:216/764 - (28%)
Similarity:339/764 - (44%) Gaps:184/764 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RNWRISETEKVGQIIDRVRAEDPDGDDLIFGIEPR------------------------FSLPGG 102
            ||:.|:..:.||.      .:|.|.|:.:..|.|.                        :::|.|
Zfish   218 RNFTITVADAVGS------GDDDDEDNGLDDIGPETENDQVYISRAPYWTHTQRMEKKLYAVPAG 276

  Fly   103 EN-------DASPPEKI-------PFQIDRETGVVTLN--------ESLAGRAGQNFLIYITVTD 145
            ..       ..||...|       .|:.:...|.:.|.        ||:......|   |..|.:
Zfish   277 NTVKFRCPATGSPLPTIRWLKNGREFRGEHRIGGIKLRHQHWSLVMESVVPSDRGN---YSCVVE 338

  Fly   146 GSYTAKNEVFINILGERENSSGYRP------QTSISNVVHNISQFLPRF--DQLPGVQSIRNGLP 202
            ..|.:....::..:.||   |.:||      ..:.:.:|...:|||.:.  |..|.:|       
Zfish   339 NKYGSIAHTYLLDVLER---SPHRPILQAGLPKNTTAIVGGDAQFLCKVYSDAQPHIQ------- 393

  Fly   203 NSRPGGWYPPVPQNNIFGPPPFGNNYPPPPPNIPGVRGEQSGEEEQPDEEVTPTTPVRISSTTPK 267
                  |...:..|        |:.|  .|..||.|:..::|.....:.||...|.:.:......
Zfish   394 ------WLKHIEMN--------GSRY--GPDGIPYVKIVKTGSLNMSEVEVLYLTNISMEDAGEY 442

  Fly   268 SRTKLTPITANNSTRVESAIPAETTTPSGGHHNNSSSPITIFS----------LKSGTIPIVVTV 322
            |      ..|.||.              |..|  .|:.:|:.|          :::....|::..
Zfish   443 S------CLAGNSI--------------GFSH--QSAWLTVLSEEDVAKEVDLMEAKYTDIIIYA 485

  Fly   323 GGFF-VAIAVLLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGP 386
            .||. :.:|:::..|||.::.. ||....|...::|:|...:.|.|.......::|..:      
Zfish   486 SGFLALVMAIVIVVLCRMQVHP-SREPFDTLPVQKLSKFPLRRQYSVESNSSGKSSASL------ 543

  Fly   387 VAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPE 451
                           |.:|....|......||....:|..                       |:
Zfish   544 ---------------MRVARLSSSCSPMLAGVMEFELPYD-----------------------PD 570

  Fly   452 NAFAGEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNIN--GNEGITTVAVKTLKESATEVD 514
                       |||||..|.....||||.||||.|.||..||  ..:.:.|||||.||:.||:.|
Zfish   571 -----------WEFPRENLTLGKPLGEGCFGQVVRAEAYGINKENQDHMATVAVKMLKDDATDKD 624

  Fly   515 RKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSR---AERHYGNTH 576
            ..||:||:|:||.::.|.|:::|||.||...|.:|::||.::|.|:.|||:.|   .:..:..|.
Zfish   625 LADLISEMELMKVMDKHKNIINLLGVCTQDGPLYVLVEYASKGSLREYLRARRPPGMDYTFDVTK 689

  Fly   577 GKSNVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIY 641
            .....||..||.|..||||:||:||.|:..|||||||||:|:|:|:..|:||||.||.|.....|
Zfish   690 VPEEQLTFKDLVSCAYQVARGMEYLASKRCIHRDLAARNVLVTEDNVMKIADFGLARGVHQIDYY 754

  Fly   642 ERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRL 706
            ::.:.|::|::|||.|:|:|.:::.:||:||||:|||||.|||.:|||||...::.:.:::|:|:
Zfish   755 KKTTNGRMPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM 819

  Fly   707 EKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKLLHTEMD-YIEL 754
            :||.:|..|||..|..||...|.:||.|.::::.||::|.:..| |::|
Zfish   820 DKPSNCTHELYMKMRECWHAVPTQRPTFKQLVEELDRVLVSISDEYLDL 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 24/144 (17%)
STYKc 470..741 CDD:214568 126/275 (46%)
PTKc 474..742 CDD:270623 125/272 (46%)
fgfr4NP_571505.1 IG_like 44..135 CDD:214653
Ig 52..136 CDD:299845
IG_like 150..224 CDD:214653 3/5 (60%)
IGc2 156..212 CDD:197706
Ig2_FGFR 268..352 CDD:143265 14/86 (16%)
IG_like 273..352 CDD:214653 14/81 (17%)
IG_like 367..461 CDD:214653 26/138 (19%)
Ig3_FGFR-2 375..462 CDD:143266 26/131 (20%)
PTKc_FGFR4 565..877 CDD:133230 139/338 (41%)
Pkinase_Tyr 578..854 CDD:285015 126/275 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.770

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