DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Clbn and emb1441

DIOPT Version :10

Sequence 1:NP_651341.2 Gene:Clbn / 43018 FlyBaseID:FBgn0259152 Length:992 Species:Drosophila melanogaster
Sequence 2:NP_199804.1 Gene:emb1441 / 835056 AraportID:AT5G49930 Length:1080 Species:Arabidopsis thaliana


Alignment Length:1114 Identity:424/1114 - (38%)
Similarity:612/1114 - (54%) Gaps:167/1114 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKTRFNTFDIICGVAELQKLVGWRVNQIYDVDNKTYLFRMQG------TGAVEKVTLLIESGTRF 59
            :|.|.||.|:...|..|::|:|.|.:.:||:..|||:|::..      :|..|||.||:|||.|.
plant     2 VKVRMNTADVAAEVKCLKRLIGMRCSNVYDISPKTYMFKLLNSSGITESGESEKVLLLMESGVRL 66

  Fly    60 HTTRFEWPKNMAPSGFSMKLRKHLKNKRLEKVQQMGSDRIVDFQFGTGDAAYHVILELYDRGNVI 124
            |||.:...|:..||||::|||||::.:|||.|:|:|.|||:.||||.|..|::||||||.:||:|
plant    67 HTTAYVRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIIVFQFGLGANAHYVILELYAQGNII 131

  Fly   125 LTDYELTTLYILRPHTEGENLRFAM--REKYPV------ERAKQPTKELELEALV------KLLE 175
            |||.|...:.:||.|.: :|..||:  |.:||:      ||......:..|.|.|      |.:|
plant   132 LTDSEYMIMTLLRSHRD-DNKGFAIMSRHRYPIEICRVFERTTVSKLQESLTAFVLKDHDAKQIE 195

  Fly   176 -NARNG--------------DY-LRQILTPNLDCGPAVIEHVLLSHGLDNHVIKKETTEETPEAE 224
             ..:||              .| |:.||...|..||.:.||::|..||         ...|..:|
plant   196 PKEQNGGKKGGKSNDSTGAKQYTLKNILGDALGYGPQLSEHIILDAGL---------VPTTKLSE 251

  Fly   225 DKPEKGGKKQRKKQQNTKLEQKPFDMVNDLPILQQAV---KDAQELIAEGNSGKSKGYIIQVKE- 285
            ||               ||:.      |::.:|.|||   :|..|.|..|.. ..:|||:..|: 
plant   252 DK---------------KLDD------NEIQLLVQAVIVFEDWLEDIINGQK-VPEGYILMQKQI 294

  Fly   286 ---EKPTENGTVEFFFRNIEFHPYLFIQFKN--FEKATFESFMEAVDEFYSTQESQKIDMKTLQQ 345
               :..:|:|.|:..:.  ||...|..|||:  :||  ||:|..|:|||||..|||:.:.:...:
plant   295 LANDTTSESGGVKKMYD--EFCSILLNQFKSRVYEK--FETFDAALDEFYSKIESQRSEQQQKAK 355

  Fly   346 EREALKKLSNVKNDHAKRLEELTKVQDVDRKKAELITSNQSLVDNAIRAVQSAIASQLSWPDIHE 410
            |..|..||:.::.|...|::.|.|..:.....||||..|...||.||.||:.|:|..:.|.|:..
plant   356 EDSASLKLNKIRQDQENRVQILKKEVNHCVNMAELIEYNLEDVDAAILAVRVALAKGMGWDDLAR 420

  Fly   411 LVKEAQANGDAVASSIKQLKLETNHISLMLSDPYDNDEDDDLKDPEVTVVDVDLALSAWANARRY 475
            :|||.:..|:.||..|.:|.||.|.::|:|.:..| :.|||.|...|..|:|||:|||..||||:
plant   421 MVKEEKKLGNPVAGVIDRLYLEKNCMTLLLCNNLD-EMDDDEKTVPVEKVEVDLSLSAHGNARRW 484

  Fly   476 YDMKRSAAQKEKKTVDASQKALKSAERKTQQTLKEVRTISNIVKARKVFWFEKFYWFISSENYLV 540
            |:||:....|::|||.|.:||.::||:||:..|.:.:.::.|...|||.|||||.||||||||||
plant   485 YEMKKKQETKQEKTVSAHEKAFRAAEKKTRHQLSQEKVVATISHMRKVHWFEKFNWFISSENYLV 549

  Fly   541 IGGRDAQQNELIVKRYMRPKDIYVHAEIQGASSVIIQNPTGEE-IPPKTLLEAGSMAISYSVAWD 604
            |.||||||||:||||||...|:|||||:.||||.:|:|...|: :||.||.:||...:.:|.|||
plant   550 ISGRDAQQNEMIVKRYMSKGDLYVHAELHGASSTVIKNHKPEQNVPPLTLNQAGCFTVCHSQAWD 614

  Fly   605 AKVVTNSYWVTSDQVSKTAPTGEYLATGSFMIRGKKNFLPSCHLTMGLSLLFKLEDSFIERHLGE 669
            :|:||:::||...||:|||||||||..|||||||||||||...|.||..|||:|::|.:..||.|
plant   615 SKIVTSAWWVYPHQVTKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGAHLNE 679

  Fly   670 RKVRSLED------------DQIDPNVKENEVEHDLLSDNEDAD---SNINLSEPSSNTEITAFP 719
            |:||..|:            |:......|||..::::|.:.:.|   |:..||:.:|:.::::..
plant   680 RRVRGEEEGMNDVVMETHAPDEHSDTESENEAVNEVVSASGEVDLQESSTALSQDTSSLDMSSSG 744

  Fly   720 NTEVKIEHDTGR----------------------IIVRSDSVNPEIEETKESEVVLDK-ILKKTD 761
            .||..:...|.:                      |....|.:..::::.:::.||.|| .:.|.:
plant   745 ITEENVASATSQLEDLLDRTLGLGAATVAGKKDTIETSKDDMEEKMKQEEKNAVVRDKPYMSKAE 809

  Fly   762 DEETTIILAGPSRKKQVSAKKTKEDKARAKQEAAKQEVPPVSSEPKNP---SQVKRGQKGKLKKM 823
            ..:..:..:|    ...:...|.::|.:.|::..........|.|.|.   .:|.|||:||||||
plant   810 RRKLKMGQSG----NTAADGNTGQEKQQRKEKDVSSLSQATKSIPDNKPAGEKVSRGQRGKLKKM 870

  Fly   824 KQKYKDQDDEEREIRMMILKSSGK--------EKPQASADKVVEKSESTKEYVK----------- 869
            |:||.|||::||:|||.:|.||||        :..:.:..:|.:.||.|.:.||           
plant   871 KEKYADQDEDERKIRMALLASSGKPQKTDVESQNAKTAVTEVKKPSEETDDAVKICYRCKKVGHL 935

  Fly   870 ------PEKSAAPKNPVELDDADEVPVGGD------VDVLNSLTGQPHEGDELLFAIPVVAPYQA 922
                  .|.|...|..:|.||..||   ||      :|| :.|||.|...|.||:|:||..||.|
plant   936 ARDCHGKETSDMDKVVMEEDDIHEV---GDEEKEKLIDV-DYLTGNPLPTDILLYAVPVCGPYNA 996

  Fly   923 LQNYKFKVKLTPGTGKRGKAAKLALNIFAKEKSCSAREKDLLKSIKEESLARNIPGKVKLSAPQL 987
            ||:||::||..||:.|:|||||.|:|:|......|.|||:|:|:..:..|...:.|.||::|..|
plant   997 LQSYKYRVKAIPGSMKKGKAAKTAMNLFTHMSEASVREKELMKACTDPELMAALVGNVKITAAGL 1061

  Fly   988 ----QKYHK 992
                ||..|
plant  1062 TQLKQKQKK 1070

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClbnNP_651341.2 RqcH_arch 8..643 CDD:469043 286/680 (42%)
PTZ00341 <654..>814 CDD:173534 40/200 (20%)
NFACT-C 893..983 CDD:432191 43/95 (45%)
emb1441NP_199804.1 RqcH_arch 10..664 CDD:469043 292/690 (42%)
PTZ00121 <775..>917 CDD:173412 41/145 (28%)
ZnF_C2HC 926..939 CDD:197667 0/12 (0%)
NFACT-C 964..1057 CDD:432191 42/93 (45%)

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