DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Clbn and Clbn

DIOPT Version :10

Sequence 1:NP_651341.2 Gene:Clbn / 43018 FlyBaseID:FBgn0259152 Length:992 Species:Drosophila melanogaster
Sequence 2:XP_312244.6 Gene:Clbn / 1273282 VectorBaseID:AGAMI1_013953 Length:1052 Species:Anopheles gambiae


Alignment Length:1071 Identity:599/1071 - (55%)
Similarity:749/1071 - (69%) Gaps:108/1071 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KTRFNTFDIICGVAELQKLVGWRVNQIYDVDNKTYLFRMQGTGAVEKVTLLIESGTRFHTTRFEW 66
            ||||||:|::|.|.|||||:|.|||||||:||||||.|:...  .|||.||:|||.|||||.|||
Mosquito     3 KTRFNTYDVVCSVTELQKLIGMRVNQIYDIDNKTYLIRLARN--EEKVVLLLESGLRFHTTSFEW 65

  Fly    67 PKNMAPSGFSMKLRKHLKNKRLEKVQQMGSDRIVDFQFGTGDAAYHVILELYDRGNVILTDYELT 131
            |||:|||||:||:||||||||||.:||:|.|||||||||||:||||:|||||||||::|||.:|.
Mosquito    66 PKNVAPSGFTMKMRKHLKNKRLESLQQLGVDRIVDFQFGTGEAAYHIILELYDRGNILLTDCDLR 130

  Fly   132 TLYILRPHTEGENLRFAMREKYPVERAKQPTKELELEALVKLLENARNGDYLRQILTPNLDCGPA 196
            .|.|||||.|||.||||:|||||.:||||......:|.:.:.::.|:.||.||..|.|.|:.|.:
Mosquito   131 ILNILRPHVEGEELRFAVREKYPKDRAKQDNGPPSMEQIKEAIQKAQPGDTLRTALNPILEYGAS 195

  Fly   197 VIEHVLLSHGLDNHVIKKETTEETPEAEDKPEKGGKKQRKKQQNTKLE-QKPFDMVNDLPILQQA 260
            ||:|||...||....|    ..|.|.....|    ||.:|||:|...| .|.|||..||..|..|
Mosquito   196 VIDHVLHRQGLFGCRI----GGELPNDPALP----KKVKKKQKNIAKEFAKVFDMETDLGPLMSA 252

  Fly   261 VKDAQELIAEGNSGKSKGYIIQVKEEKPTENG-TVEFFFRNIEFHPYLFIQFKNFEKATFESFME 324
            :.:|:.::.|.....|.|||||.||.|||:.| ..|::|.|:|:.||::.|::......|:||..
Mosquito   253 INEAETMLREAQKHPSPGYIIQKKEVKPTKQGDEEEYYFTNLEYQPYMYNQYQGEPFKAFDSFTT 317

  Fly   325 AVDEFYSTQESQKIDMKTLQQEREALKKLSNVKNDHAKRLEELTKVQDVDRKKAELITSNQSLVD 389
            |||||||:.||||||:|...|||||||||||||.|||||:|||||.|..|||:|||||.||.|||
Mosquito   318 AVDEFYSSLESQKIDLKAFAQEREALKKLSNVKTDHAKRIEELTKAQLEDRKRAELITRNQDLVD 382

  Fly   390 NAIRAVQSAIASQLSWPDIHELVKEAQANGDAVASSIKQLKLETNHISLMLSDPY---------- 444
            .|:.|||||:|:|:||.||.:|||.||||.|.|||.|:|||||.|||||.|:|||          
Mosquito   383 KALLAVQSALAAQMSWTDIQDLVKAAQANKDPVASCIRQLKLEINHISLHLTDPYASLDEQASDE 447

  Fly   445 DNDEDDDLKDPEV----TVVDVDLALSAWANARRYYDMKRSAAQKEKKTVDASQKALKSAERKTQ 505
            :.:||.:.:|.|.    .||||||||||:||||||||.:|.||:||:||:::|.||||:|||||.
Mosquito   448 EEEEDSEREDDEAKLVPMVVDVDLALSAFANARRYYDQRRFAARKEQKTIESSSKALKNAERKTI 512

  Fly   506 QTLKEVRTISNIVKARKVFWFEKFYWFISSENYLVIGGRDAQQNELIVKRYMRPKDIYVHAEIQG 570
            ||||:|||.:.|.|.|||:||||||||:||||||||||||.|||||||||||||.||||||||||
Mosquito   513 QTLKDVRTQTTISKVRKVYWFEKFYWFVSSENYLVIGGRDQQQNELIVKRYMRPTDIYVHAEIQG 577

  Fly   571 ASSVIIQNPTGEEIPPKTLLEAGSMAISYSVAWDAKVVTNSYWVTSDQVSKTAPTGEYLATGSFM 635
            ||||||:||.|.|||||||||||:|||||||||||||||::|||.|:||||||||||||.|||||
Mosquito   578 ASSVIIKNPAGGEIPPKTLLEAGTMAISYSVAWDAKVVTSAYWVHSEQVSKTAPTGEYLTTGSFM 642

  Fly   636 IRGKKNFLPSCHLTMGLSLLFKLEDSFIERHLGERKVRSLED------DQIDPNVKENEVEHDLL 694
            |||:|||||.|||.:|||.|||||||.:|||.|||:||:.:|      |::...:.|.|.|.::.
Mosquito   643 IRGRKNFLPPCHLVLGLSFLFKLEDSSVERHRGERRVRTFDDESVISKDEVRSEISEQEAEQEIK 707

  Fly   695 SDNEDADSN----------------------IN------------------LSEPSSNTE---IT 716
            .:::::|.:                      :|                  |.||:...|   :.
Mosquito   708 LEDDESDQDDEQEPSQSQTEPKQEADTLPGQVNKLSIAKKEKPVEKSSSEPLPEPAEEEEDNDLP 772

  Fly   717 AFPNTEVKIEHDTGRIIVRSDSVNPEIEETKESEVVLDKILKKTDDEETTIILAGPSRKKQVSAK 781
            .||:|.:|:|||||::.||:|   |.::.. .||...|.::...||:...|..:.| ||||:|..
Mosquito   773 QFPDTHIKVEHDTGKVSVRAD---PMLQRL-TSEPDPDSVIFLGDDKPYIIQPSAP-RKKQISKS 832

  Fly   782 KTK-EDKARAKQEAAKQEVPP--VSSEPKNPSQVKRGQKGKLKKMKQKYKDQDDEEREIRMMILK 843
            |.| :|:...:|:|.:::..|  .:.|.:.|.|:|||||.|::|:|:|||||||::|::.|.|||
Mosquito   833 KQKAKDQKEKEQKAKEKQAAPAKAAEEQQKPGQLKRGQKAKMRKIKEKYKDQDDDDRKLIMEILK 897

  Fly   844 SSGKEKPQASADKVVEKSESTKEYVKPEKSAA-------------PK-NPVELDD-ADEVPVGGD 893
            |:|..|          :.|.||:.....:..|             |: .|.|.:: .|:.|...|
Mosquito   898 SAGNRK----------QDEGTKDDADQRQDGAGGGKGGGGVGKRTPRLKPGEFEELGDDTPAAAD 952

  Fly   894 VDVLNSLTGQPHEGDELLFAIPVVAPYQALQNYKFKVKLTPGTGKRGKAAKLALNIFAKEKSCSA 958
            :|:|::|||||.|.||||||||||||||:|.|||:||||||||||||||:|:||.||.|:|.|:|
Mosquito   953 LDMLDTLTGQPVEEDELLFAIPVVAPYQSLHNYKYKVKLTPGTGKRGKASKMALQIFLKDKQCTA 1017

  Fly   959 REKDLLKSIKEESLARNIPGKVKLSAPQLQK 989
            |||||||::|:|.|||||||||||||||:||
Mosquito  1018 REKDLLKAVKDEVLARNIPGKVKLSAPQMQK 1048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClbnNP_651341.2 RqcH_arch 8..643 CDD:469043 416/650 (64%)
PTZ00341 <654..>814 CDD:173534 60/211 (28%)
NFACT-C 893..983 CDD:432191 69/89 (78%)
ClbnXP_312244.6 None

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