DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Clbn and nemf

DIOPT Version :9

Sequence 1:NP_001163721.1 Gene:Clbn / 43018 FlyBaseID:FBgn0259152 Length:992 Species:Drosophila melanogaster
Sequence 2:XP_002938173.3 Gene:nemf / 100497173 XenbaseID:XB-GENE-5772016 Length:1058 Species:Xenopus tropicalis


Alignment Length:1106 Identity:496/1106 - (44%)
Similarity:680/1106 - (61%) Gaps:173/1106 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKTRFNTFDIICGVAEL-QKLVGWRVNQIYDVDNKTYLFRMQGTGAVEKVTLLIESGTRFHTTRF 64
            ||:||||.||...:||| ..|:|.||:.:|||||||||.|:|...:  |..||:|||.|.|||.|
 Frog     1 MKSRFNTIDIRAVIAELSDSLLGLRVHNVYDVDNKTYLIRLQKPDS--KAVLLVESGIRIHTTEF 63

  Fly    65 EWPKNMAPSGFSMKLRKHLKNKRLEKVQQMGSDRIVDFQFGTGDAAYHVILELYDRGNVILTDYE 129
            ||||||.||||:||.|||||::||..::|:|.|||||||||:.:||||:|:|||||||::|||:|
 Frog    64 EWPKNMMPSGFAMKCRKHLKSRRLVSIKQLGVDRIVDFQFGSDEAAYHLIVELYDRGNIVLTDHE 128

  Fly   130 LTTLYILRPHT-EGENLRFAMREKYPVERAKQPTKELELEALVKLLENARNGDYLRQILTPNLDC 193
            ...|.|||..| |.::::||:||.||::.||.|...|.:|.|.::||.|:.||.|:::|.|:|..
 Frog   129 YLILNILRFRTDEADDVKFAVREHYPIDHAKAPEPLLSVEKLKEILEKAQKGDQLKRVLNPHLPY 193

  Fly   194 GPAVIEHVLLSHGLDNHVIKKETTEETPEAEDKPEKGGKKQRKKQQNTKLEQKPFDMVNDLPILQ 258
            |..:|||.||..||.:                              |.|::|  .....||..:.
 Frog   194 GATLIEHCLLDTGLSS------------------------------NVKVDQ--ISGPEDLEKVH 226

  Fly   259 QAVKDAQELIAEGNSGKSKGYIIQVKEEKPT--ENGTVEFFFRNIEFHPYLFIQFKNFEKATFES 321
            .|::.|:|.:......|.||:|||.:|:||:  .:...|..|.|.||||:||.|..|......:|
 Frog   227 TALRKAEEYMDVTQHFKGKGFIIQKREKKPSLEPDKPSEDIFTNEEFHPFLFAQHCNNTYIELDS 291

  Fly   322 FMEAVDEFYSTQESQKIDMKTLQQEREALKKLSNVKNDHAKRLEELTKVQDVDRKKAELITSNQS 386
            |.:|||||:|..|.|:||:|.||||::|||||.||:.||.:|||.|...||.|:.|.|||..|..
 Frog   292 FNKAVDEFFSKMEGQRIDLKALQQEKQALKKLENVRKDHEERLESLQHAQDADKAKGELIEMNLD 356

  Fly   387 LVDNAIRAVQSAIASQLSWPDIHELVKEAQANGDAVASSIKQLKLETNHISLMLSDPY------- 444
            :||.||:.|:||:|:|:.|.:|..:|||||..||:||.:||:|||:||||:::|.:||       
 Frog   357 IVDRAIQVVRSALANQIDWKEIGLIVKEAQIQGDSVALAIKELKLQTNHITMLLKNPYTLSEEGS 421

  Fly   445 DNDEDDDLKDP------------------EVTVVDVDLALSAWANARRYYDMKRSAAQKEKKTVD 491
            :::|::..::|                  :..:|||||:|||:|||::|||.||.||:|.:||::
 Frog   422 EDEEEEKEEEPKGKKKKSKNKQPKKVQKNKPVLVDVDLSLSAYANAKKYYDHKRHAAKKSQKTIE 486

  Fly   492 ASQKALKSAERKTQQTLKEVRTISNIVKARKVFWFEKFYWFISSENYLVIGGRDAQQNELIVKRY 556
            |::||.||||:||:||||||:|:|.|.|||||:|||||.|||||||||||.|||.||||||||||
 Frog   487 AAEKAFKSAEKKTKQTLKEVQTVSTIQKARKVYWFEKFLWFISSENYLVIAGRDQQQNELIVKRY 551

  Fly   557 MRPKDIYVHAEIQGASSVIIQNPTGEEIPPKTLLEAGSMAISYSVAWDAKVVTNSYWVTSDQVSK 621
            :.|.|:||||::.||:|.:|:|||||.:||:||.|||:||:.||.||||:|:|:::||..:||||
 Frog   552 LNPGDVYVHADLHGATSCVIKNPTGEPVPPRTLTEAGTMAVCYSAAWDARVITSAWWVHHNQVSK 616

  Fly   622 TAPTGEYLATGSFMIRGKKNFLPSCHLTMGLSLLFKLEDSFIERHLGERKVRSLEDDQ------- 679
            ||||||||.||||||||||||||..:|.||...|||:::..:.||.|||:|:.|::|.       
 Frog   617 TAPTGEYLTTGSFMIRGKKNFLPPSYLMMGFGFLFKVDEPCVWRHKGERRVKQLDEDMESVTSSN 681

  Fly   680 ----IDPNVKENEVEHDLLSDNED---------------------------ADSNINLSEPSSNT 713
                .:.|:..:..|.|..|..||                           ||.|.:  :.|||:
 Frog   682 TELAAEENIPLDAAEEDSNSSEEDEKLDTQEEQRGPCTDSMGLEQKEYMVPADQNSD--QESSNS 744

  Fly   714 EIT-----------AFPNTEVKIEH-DTGRIIVR---SDSVNPEIEETKES---------EVVLD 754
            |..           ::|:|.:.:.| .|.|.:.:   ::.|:..:|..|.|         :..|.
 Frog   745 EENSTIKEEAEKELSYPDTAIDLSHLQTKRTLSKAAPAELVDTPLENEKSSGRKHMSAKEKRELK 809

  Fly   755 KILKKTDDEETTIILAGPSRKKQVSAKKTKEDKARAKQEAAKQEVPPVSSEPKNPSQVKRGQKGK 819
            |..|..|.:|..     ||.:|:...||          :.|..:..|.:|....|  :|||||.|
 Frog   810 KKKKPNDKDEFQ-----PSEQKETDDKK----------DVADSQSAPQASTGNQP--MKRGQKSK 857

  Fly   820 LKKMKQKYKDQDDEEREIRMMILKSSG--KEKPQASADKVVEKSESTKEYVKPEKSAAPKNPV-- 880
            |||:|:||||||:|:|::.|.:|.|:|  ||.......|...|.|..|:..:..|...|: ||  
 Frog   858 LKKIKEKYKDQDEEDRDLIMQLLGSAGSNKEDKGKKGKKGKMKEEPVKKPPQKAKGGGPR-PVKR 921

  Fly   881 ----------------------ELDDADEVPVGGD--VDVLNSLTGQPHEGDELLFAIPVVAPYQ 921
                                  :.::||:.|.|.:  .::|:|||||||..|.|||::||.|||.
 Frog   922 EGPADVFLTEDLHEMTLEEQQEDKEEADQDPQGTEEAENLLDSLTGQPHGEDVLLFSVPVCAPYT 986

  Fly   922 ALQNYKFKVKLTPGTGKRGKAAKLALNIFAKEKSCSAREKDLLKSIKEESLARNIPGKVKLSAPQ 986
            ::.|||:||||||||.|:|||||.|||.|...|..:.||||||:|:|:..|:||:|||||:|||.
 Frog   987 SMTNYKYKVKLTPGTHKKGKAAKTALNSFMHSKDSTVREKDLLRSVKDTDLSRNMPGKVKVSAPN 1051

  Fly   987 L 987
            |
 Frog  1052 L 1052

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClbnNP_001163721.1 YloA 1..643 CDD:224212 348/670 (52%)
DUF814 531..630 CDD:283353 69/98 (70%)
DUF3441 883..984 CDD:288752 59/102 (58%)
nemfXP_002938173.3 YloA 1..638 CDD:224212 348/670 (52%)
DUF3441 956..1048 CDD:403211 55/91 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 437 1.000 Domainoid score I558
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3458
Inparanoid 1 1.050 845 1.000 Inparanoid score I434
OMA 1 1.010 - - QHG54163
OrthoDB 1 1.010 - - D131285at2759
OrthoFinder 1 1.000 - - FOG0005262
OrthoInspector 1 1.000 - - oto103137
Panther 1 1.100 - - LDO PTHR15239
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1916
SonicParanoid 1 1.000 - - X4285
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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