DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vig2 and serbp1b

DIOPT Version :10

Sequence 1:NP_733083.1 Gene:vig2 / 43016 FlyBaseID:FBgn0046214 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_005171185.1 Gene:serbp1b / 797732 ZFINID:ZDB-GENE-031118-196 Length:410 Species:Danio rerio


Alignment Length:464 Identity:132/464 - (28%)
Similarity:188/464 - (40%) Gaps:128/464 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NRYELLFMDDDDSSGL---AQPQIAAVVAAPKKPEPAKAPKAPKSKSEKENKPVVAARKAN---- 95
            ||::.|..|:.|...:   |:.:.....|:......|:|.|.||.:|:|:.|.....:|.:    
Zfish    15 NRFDQLLDDESDPFEILKAAENKKKDAAASGGSKTAAQAAKQPKKESQKDRKNTAQDKKEDIQPP 79

  Fly    96 APVAKNASPVKGGK-----GPA------GGDVGRP------KNP--------TANGANNQGRFNN 135
            .|:.|......|.|     |||      |...|||      :.|        .|:.....|.|:.
Zfish    80 VPLKKEGMRRVGRKPEQQQGPASSQHPGGPGEGRPGDRRPDRRPPRERRFDKPADEKPEGGDFSA 144

  Fly   136 NQRYGNKESNGEFGNELPQRQFNNRDNRGPPRVRTGEKF---GKREFDRQSGSDRTGVKSIDKRE 197
            ::..|:|.|.|..|.     :...|..||....| |:.|   |||:|||.||:|:...|..:||.
Zfish   145 DKPIGDKPSRGRGGG-----RGMGRGGRGRGMGR-GDGFDSRGKRDFDRHSGNDKARQKGEEKRS 203

  Fly   198 GGGAHNWGSPKQDIEDLKTTG--ETSPQAEKEDSANEQSADPAVAAEEDES-KQMTLDEWKALRD 259
            |.|:||||..|::..:|..:.  |..|:.|:...|:.::.:..|...:||. |:||||||||::|
Zfish   204 GSGSHNWGGVKEETSELDQSAAPEPVPEGEEHAPADSENKENEVEEVKDEGPKEMTLDEWKAMQD 268

  Fly   260 -QRAKPNYNLRKAGEGAADNAEWKKMIVLSKKK--------ESNSEDELE---YDPSLYPQ---- 308
             :|||..:|:||..||  ::.:|||..||.|.|        |.::...:|   .||..:.:    
Zfish   269 KERAKVEFNIRKPNEG--NDGQWKKGYVLHKSKSEEVGTVGERHAGSVIEAGDVDPDSFHKAEEG 331

  Fly   309 -----RVGRLQRIVDIQFNFNDGRKVGFRKGPRPGAGPREGGFRNDGPRGEGGYRNDGPRGEGGY 368
                 |.........::.||.|   :|     |||.|  .||.|.    |.||      ||.|| 
Zfish   332 GDHHFRKPANDITSQLEINFGD---LG-----RPGRG--RGGSRG----GRGG------RGGGG- 375

  Fly   369 RNDGPRGEGPRNEGPRGEGYRNDGPRGEGFRGPRFNNGPSNGYENRQDNNRFGEKRRSAQKPLKV 433
               |..|..|...|.|.|       :|.|...|                              .|
Zfish   376 ---GSGGGRPSRGGGRSE-------KGGGVSVP------------------------------NV 400

  Fly   434 DDEAQFPTL 442
            ||...||.|
Zfish   401 DDPEAFPAL 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vig2NP_733083.1 HABP4_PAI-RBP1 175..273 CDD:461421 43/101 (43%)
PRK11634 <339..406 CDD:236941 20/66 (30%)
serbp1bXP_005171185.1 IHABP4_N 5..>99 CDD:465041 20/83 (24%)
HABP4_PAI-RBP1 181..283 CDD:461421 43/101 (43%)

Return to query results.
Submit another query.