DRSC/TRiP Functional Genomics Resources

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Protein Alignment vig2 and Serbp1

DIOPT Version :9

Sequence 1:NP_733083.1 Gene:vig2 / 43016 FlyBaseID:FBgn0046214 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_080090.2 Gene:Serbp1 / 66870 MGIID:1914120 Length:407 Species:Mus musculus


Alignment Length:403 Identity:122/403 - (30%)
Similarity:170/403 - (42%) Gaps:108/403 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NRYELLFMDDDD----------------SSGLAQPQIAAVVAAPKKPEPAKAPKAPKSKSEKENK 86
            ||::.||.|:.|                ..|:..|...:...|..:.....|.|..:.:|:|:.|
Mouse    15 NRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRK 79

  Fly    87 -PV-----VAARK--ANAPVAKNASPVKGGKGPAGGDVGRPKNPTANGANN------QGRFNNNQ 137
             |:     ||.:|  ...|||.....::        .|||..:....|...      :.|....:
Mouse    80 NPLPPSVGVADKKEETQPPVALKKEGIR--------RVGRRPDQQLQGDGKLIDRRAERRPPRER 136

  Fly   138 RY----GNKESNGEFGNELP--QRQFNNRDNRGPPR------VRTGEKF---GKREFDRQSGSDR 187
            |:    ..|...|||..:.|  :|....|...|..|      :..|:.|   |||||||.|||||
Mouse   137 RFEKPLEEKGEGGEFSVDRPIIERPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDR 201

  Fly   188 ------TGVKSIDKREGGGAHNWG--------SPK----------QDIEDLKTT-----GETSPQ 223
                  :|:|..|||.|.|:||||        |||          .|::....|     ||..|.
Mouse   202 SSFSHYSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNCSDLDQSNVTEETPEGEEHPV 266

  Fly   224 AEKEDSANEQSADPAVAAEEDESKQMTLDEWKALRDQ-RAKPNYNLRKAGEGAADNAEWKKMIVL 287
            |:.|:..||     ....:|:..|:||||||||:::: |||..:|:||..|||  :.:|||..||
Mouse   267 ADTENKENE-----VEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGA--DGQWKKGFVL 324

  Fly   288 --SKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQFNFNDGRKVGFRKGPRPGAGPREGGFRNDG 350
              ||.:|:::||.:.......|......|    ::.||.|   :|     |||.|.|.|    .|
Mouse   325 HKSKSEEAHAEDSVMDHHFRKPANDITSQ----LEINFGD---LG-----RPGRGGRGG----RG 373

  Fly   351 PRGEGGYRNDGPR 363
            .||.||..|.|.|
Mouse   374 GRGRGGRPNRGSR 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vig2NP_733083.1 HABP4_PAI-RBP1 175..273 CDD:282609 51/127 (40%)
Serbp1NP_080090.2 IHABP4_N 5..119 CDD:292792 24/111 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..227 55/201 (27%)
HABP4_PAI-RBP1 189..312 CDD:282609 51/127 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..288 11/50 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..407 25/76 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837161
Domainoid 1 1.000 79 1.000 Domainoid score I8639
eggNOG 1 0.900 - - E1_KOG2945
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4516
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48663
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 1 1.000 - - mtm8776
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5307
SonicParanoid 1 1.000 - - X1570
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.890

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