DRSC/TRiP Functional Genomics Resources

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Protein Alignment vig2 and Habp4

DIOPT Version :9

Sequence 1:NP_733083.1 Gene:vig2 / 43016 FlyBaseID:FBgn0046214 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_064370.2 Gene:Habp4 / 56541 MGIID:1891713 Length:412 Species:Mus musculus


Alignment Length:372 Identity:98/372 - (26%)
Similarity:149/372 - (40%) Gaps:106/372 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SSGLAQPQIAAVVAAPKKPEPAKAPKAPK---------------------SKSEKENKPVVAARK 93
            :||..||.      :|..|:|....:.|:                     .:|.:|.:|....|:
Mouse   101 ASGAQQPD------SPGGPQPPGQKRTPRRGEQQGWNDNRGTDVVLERAERRSYREYRPYETERQ 159

  Fly    94 ANAPVAK-----------NASPVKGGKGPAGGDVGRPKNPTANGANNQGRFNNNQRYGNKESNGE 147
            |:.||.|           ...|::|..||.|            |..::||             |.
Mouse   160 ADLPVEKFTDEKPVDRFDRDRPLRGRGGPRG------------GLRSRGR-------------GG 199

  Fly   148 FGNELPQRQFNNRDNRGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAHNWGSPK--QD 210
            .||    |.|::.|.|           |||:|:|.|.:|:|. :..|...|.|...|||.|  .|
Mouse   200 PGN----RAFDSFDQR-----------GKRDFERYSSNDKTN-RMEDSMGGCGIRPWGSGKDTSD 248

  Fly   211 IEDLKTTGETSPQAEKEDSANEQSAD--PAVAAEED-ESKQMTLDEWKALRDQ-RAKPNYNLRKA 271
            .|......|||...|.:.:.:|:||.  |.:..||: :.::|||||||.|::| |.||.:|:|| 
Mouse   249 TEPPAPMEETSMMEECQGALDEESAAKVPELEVEEENQVQEMTLDEWKNLQEQTRPKPEFNIRK- 312

  Fly   272 GEGAADNAEWKKMIVLSKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQFNFNDGRKVGFRKGPR 336
                .::....|.:|:.|.:..:...:.:|:...:..|.........::.||.:        .||
Mouse   313 ----PESTVPSKAVVIHKSRYRDDMVKEDYEDESHVFRKAANDITSQLEINFGN--------LPR 365

  Fly   337 PGAGPREGGFRNDGPRGEGGYR---NDGPRGEGGYRNDGPRGEGPRN 380
            ||.|.| |..|.    |.|..|   |.|||.|...::..|..:.|.:
Mouse   366 PGRGAR-GSTRG----GRGRMRRTENYGPRAEVVTQDVAPNPDDPED 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vig2NP_733083.1 HABP4_PAI-RBP1 175..273 CDD:282609 42/103 (41%)
Habp4NP_064370.2 IHABP4_N 16..131 CDD:292792 8/35 (23%)
HABP4_PAI-RBP1 212..315 CDD:282609 42/108 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..319 8/26 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 359..412 20/62 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837160
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2945
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4516
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48663
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 1 1.000 - - mtm8776
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1570
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.860

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