DRSC/TRiP Functional Genomics Resources

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Protein Alignment vig2 and zgc:103482

DIOPT Version :9

Sequence 1:NP_733083.1 Gene:vig2 / 43016 FlyBaseID:FBgn0046214 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_005161229.1 Gene:zgc:103482 / 450001 ZFINID:ZDB-GENE-041010-115 Length:348 Species:Danio rerio


Alignment Length:446 Identity:116/446 - (26%)
Similarity:162/446 - (36%) Gaps:158/446 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NRYELLFMDDDD------SSGLAQPQIAAVVAAPKKPEPAK---APKAPKSKSEKENKPVVAARK 93
            ||:..|..|:.|      ::|..:.|      ..||.||.|   ..|:.|.:|:::.|.::.|  
Zfish    19 NRFGQLLGDESDPFDILYAAGTEKKQ------KKKKEEPKKTSTTTKSVKKESQRDRKTILPA-- 75

  Fly    94 ANAPVAKNASPVKGGKGPAGGDVGRP-----KNPTANGANNQGRFNNNQRYGNKESNGEFGNELP 153
                         ||    ||.| ||     :.|.........:||:.::     ....|..|.|
Zfish    76 -------------GG----GGQV-RPGHEVVEEPIQRRVTFDRKFNDAEK-----PPLSFSVERP 117

  Fly   154 ----QRQFNNRDN------RGP--PRVRTG-EKFGKREFDRQSGSDRT-GVKSIDKREGGGAHNW 204
                .|....|..      |||  ||...| ::.|||||:|.|||||: .|:|.:||.|.|:.||
Zfish   118 VDVLDRPARGRGTGRGKGARGPGFPRSNDGFDQRGKREFERHSGSDRSRSVRSEEKRSGSGSRNW 182

  Fly   205 G------------SPKQDIEDLKTTGETSPQAEKEDSANEQSADPAVAAEEDESKQMTLDEWKAL 257
            |            ||.:::    |..|.:.:|.:.|..|..|....|.   :.:.:|||||||||
Zfish   183 GSVRDHMSVIEVASPSEEV----TENEETQEAVETDGENRPSETEEVI---EVAMEMTLDEWKAL 240

  Fly   258 RDQ-RAKPNYNLRKAGEGAADNAEWKKMIVLSKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQF 321
            ::| |.|...|:||     .:::...|.:|:.|.|....:|.::.|...     .|....:..|.
Zfish   241 QEQSRPKVELNIRK-----TESSVPSKAVVIHKSKLLQKQDGMDEDVVF-----RRPANDITCQL 295

  Fly   322 NFNDGRKVGFRKGPRPGAGPREGGFRNDGPRGEGGYRNDGPRGEGGYRNDGPRGEGPRNEGPRGE 386
            .||      |....||..|                       |.||             .|.||.
Zfish   296 EFN------FGSLDRPTRG-----------------------GRGG-------------RGGRGR 318

  Fly   387 GYRNDGPRGEGFRGPRFNNGPSNGYENRQDNNRFGEKRRSAQKPLKVDDEAQFPTL 442
            |    ||.....|.|                    :|..||..|   ||...||.|
Zfish   319 G----GPSMPTLRSP--------------------QKFDSAPNP---DDPEDFPAL 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vig2NP_733083.1 HABP4_PAI-RBP1 175..273 CDD:282609 44/111 (40%)
zgc:103482XP_005161229.1 IHABP4_N 11..96 CDD:292792 25/102 (25%)
HABP4_PAI-RBP1 152..254 CDD:282609 42/108 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580733
Domainoid 1 1.000 97 1.000 Domainoid score I7158
eggNOG 1 0.900 - - E1_KOG2945
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 156 1.000 Inparanoid score I4255
OMA 1 1.010 - - QHG48663
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 1 1.000 - - mtm6592
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1570
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.860

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