DRSC/TRiP Functional Genomics Resources

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Protein Alignment vig2 and vig

DIOPT Version :10

Sequence 1:NP_733083.1 Gene:vig2 / 43016 FlyBaseID:FBgn0046214 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_523572.1 Gene:vig / 34885 FlyBaseID:FBgn0024183 Length:490 Species:Drosophila melanogaster


Alignment Length:504 Identity:213/504 - (42%)
Similarity:266/504 - (52%) Gaps:108/504 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 MDNSGNNRYELLFMDDDDSSGL----AQPQIAAVVAAPKKPEPAKA------------------- 73
            ||::|.|||||||||||.|..|    |....||..||.||.:|:.|                   
  Fly     1 MDSAGKNRYELLFMDDDVSDPLDNLVAPTAAAAAAAAGKKKQPSAAAAAATKTTANKVANSNNKA 65

  Fly    74 --------PKAPK-SKSEKENKPVVAARKAN----APVAKN---------ASPVKGGKGP-AGGD 115
                    |.|.| :::||||||..|..|.:    .|.|.|         :|..|....| .||.
  Fly    66 NAGSNIGGPNAKKPNQAEKENKPNNALNKTDGKKFTPSADNKQQQFNNNASSNYKQQGAPRQGGG 130

  Fly   116 VGRPKNPTANGANNQGRFNNNQRYGN-KESNGEFGNELPQRQFNNRDN----------------R 163
            ..|.:...:.....||:....||..| ::.|   ||...:.|.|||.|                |
  Fly   131 ANRTREFGSGQGQGQGQGGQQQRSVNFRQQN---GNAETREQRNNRRNVRENVGAPDGQQSRPYR 192

  Fly   164 GP----------PRVRTGEKFG---KREFDRQSGSDRTGVKSIDKREGGGAHNWGSPKQDIEDL- 214
            ||          |:.:.....|   |||||||||||||||||||||:|.|:|||||.|:.|:|: 
  Fly   193 GPGGGPGAGGDRPQRQNRNYDGQNRKREFDRQSGSDRTGVKSIDKRDGAGSHNWGSVKEAIDDVN 257

  Fly   215 KTTGETS-PQAEKEDSANEQSADP--AVAAEEDESKQMTLDEWKALRDQRAKPNYNLRKAGEGAA 276
            |...||: ..||....|:|...:|  ..|..|:|:|::|||||||.:.||.||.:|:|||||| .
  Fly   258 KNESETNVTNAEGGAKADESGTEPQNEQATAEEEAKELTLDEWKAQQGQRIKPTFNIRKAGEG-E 321

  Fly   277 DNAEWKKMIVL--SKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQFNFNDGRK---VGFRKGPR 336
            |..:||||:||  :||||::||:||||||:||||||||.||::||||||||||:   .||  |.|
  Fly   322 DTTQWKKMVVLTSNKKKENDSEEELEYDPALYPQRVGRQQRVLDIQFNFNDGRRGGPGGF--GGR 384

  Fly   337 PG-AGPREGGFRNDGPRGEGGYRNDGPRGEGGYRNDGPRGEGPRNEGPRGEGYRND--GPRGEGF 398
            .| .|||.||| ..|||.|||.|:.|.| |||..|......|||:    |:.:.|:  |...:..
  Fly   385 GGRGGPRPGGF-GGGPRSEGGNRDGGNR-EGGRDNREGGNRGPRD----GQQHNNEGGGSSAQNQ 443

  Fly   399 RGPRFNNGPSNGYENRQD-----NNRFGEKRRSAQKPLKVDDEAQFPTL 442
            |.|....||.|...|.|:     |.||..::.:|.   ||:||.|||||
  Fly   444 RPPIDRRGPGNNQNNNQNSGPGPNKRFERQQNTAP---KVNDERQFPTL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vig2NP_733083.1 HABP4_PAI-RBP1 175..273 CDD:461421 59/104 (57%)
PRK11634 <339..406 CDD:236941 27/68 (40%)
vigNP_523572.1 HABP4_PAI-RBP1 218..319 CDD:461421 58/100 (58%)

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