DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vig2 and vig

DIOPT Version :9

Sequence 1:NP_733083.1 Gene:vig2 / 43016 FlyBaseID:FBgn0046214 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_523572.1 Gene:vig / 34885 FlyBaseID:FBgn0024183 Length:490 Species:Drosophila melanogaster


Alignment Length:504 Identity:213/504 - (42%)
Similarity:266/504 - (52%) Gaps:108/504 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 MDNSGNNRYELLFMDDDDSSGL----AQPQIAAVVAAPKKPEPAKA------------------- 73
            ||::|.|||||||||||.|..|    |....||..||.||.:|:.|                   
  Fly     1 MDSAGKNRYELLFMDDDVSDPLDNLVAPTAAAAAAAAGKKKQPSAAAAAATKTTANKVANSNNKA 65

  Fly    74 --------PKAPK-SKSEKENKPVVAARKAN----APVAKN---------ASPVKGGKGP-AGGD 115
                    |.|.| :::||||||..|..|.:    .|.|.|         :|..|....| .||.
  Fly    66 NAGSNIGGPNAKKPNQAEKENKPNNALNKTDGKKFTPSADNKQQQFNNNASSNYKQQGAPRQGGG 130

  Fly   116 VGRPKNPTANGANNQGRFNNNQRYGN-KESNGEFGNELPQRQFNNRDN----------------R 163
            ..|.:...:.....||:....||..| ::.|   ||...:.|.|||.|                |
  Fly   131 ANRTREFGSGQGQGQGQGGQQQRSVNFRQQN---GNAETREQRNNRRNVRENVGAPDGQQSRPYR 192

  Fly   164 GP----------PRVRTGEKFG---KREFDRQSGSDRTGVKSIDKREGGGAHNWGSPKQDIEDL- 214
            ||          |:.:.....|   |||||||||||||||||||||:|.|:|||||.|:.|:|: 
  Fly   193 GPGGGPGAGGDRPQRQNRNYDGQNRKREFDRQSGSDRTGVKSIDKRDGAGSHNWGSVKEAIDDVN 257

  Fly   215 KTTGETS-PQAEKEDSANEQSADP--AVAAEEDESKQMTLDEWKALRDQRAKPNYNLRKAGEGAA 276
            |...||: ..||....|:|...:|  ..|..|:|:|::|||||||.:.||.||.:|:|||||| .
  Fly   258 KNESETNVTNAEGGAKADESGTEPQNEQATAEEEAKELTLDEWKAQQGQRIKPTFNIRKAGEG-E 321

  Fly   277 DNAEWKKMIVL--SKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQFNFNDGRK---VGFRKGPR 336
            |..:||||:||  :||||::||:||||||:||||||||.||::||||||||||:   .||  |.|
  Fly   322 DTTQWKKMVVLTSNKKKENDSEEELEYDPALYPQRVGRQQRVLDIQFNFNDGRRGGPGGF--GGR 384

  Fly   337 PG-AGPREGGFRNDGPRGEGGYRNDGPRGEGGYRNDGPRGEGPRNEGPRGEGYRND--GPRGEGF 398
            .| .|||.||| ..|||.|||.|:.|.| |||..|......|||:    |:.:.|:  |...:..
  Fly   385 GGRGGPRPGGF-GGGPRSEGGNRDGGNR-EGGRDNREGGNRGPRD----GQQHNNEGGGSSAQNQ 443

  Fly   399 RGPRFNNGPSNGYENRQD-----NNRFGEKRRSAQKPLKVDDEAQFPTL 442
            |.|....||.|...|.|:     |.||..::.:|.   ||:||.|||||
  Fly   444 RPPIDRRGPGNNQNNNQNSGPGPNKRFERQQNTAP---KVNDERQFPTL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vig2NP_733083.1 HABP4_PAI-RBP1 175..273 CDD:282609 59/104 (57%)
vigNP_523572.1 HABP4_PAI-RBP1 217..319 CDD:282609 58/101 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449184
Domainoid 1 1.000 52 1.000 Domainoid score I4255
eggNOG 1 0.900 - - E1_KOG2945
Homologene 1 1.000 - - H136326
Inparanoid 1 1.050 101 1.000 Inparanoid score I2167
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 1 1.000 - - mtm6592
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12299
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5307
SonicParanoid 1 1.000 - - X1570
1110.920

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