DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vig2 and SERBP1

DIOPT Version :9

Sequence 1:NP_733083.1 Gene:vig2 / 43016 FlyBaseID:FBgn0046214 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001018077.1 Gene:SERBP1 / 26135 HGNCID:17860 Length:408 Species:Homo sapiens


Alignment Length:404 Identity:120/404 - (29%)
Similarity:166/404 - (41%) Gaps:109/404 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NRYELLFMDDDD----------------SSGLAQPQIAAVVAAPKKPEPAKAPKAPKSKSEKENK 86
            ||::.||.|:.|                ..|:..|...:...|..:.....|.|..:.:|:|:.|
Human    15 NRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRK 79

  Fly    87 ----PVVAA----RKANAPVAKNASPVKGGKGPAGGDVGRPKNPTANGANN------QGRFNNNQ 137
                |.|..    .:...|||.....::        .|||..:....|...      :.|....:
Human    80 NPLPPSVGVVDKKEETQPPVALKKEGIR--------RVGRRPDQQLQGEGKIIDRRPERRPPRER 136

  Fly   138 RY----GNKESNGEFGNELP--QRQFNNRDNRGPPR------VRTGEKF---GKREFDRQSGSDR 187
            |:    ..|...|||..:.|  .|....|...|..|      :..|:.|   |||||||.|||||
Human   137 RFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDR 201

  Fly   188 ------TGVKSIDKREGGGAHNWG--------SPK----------QDIEDLKTTGET------SP 222
                  :|:|..|||.|.|:||||        |||          .|::....|.||      .|
Human   202 SSFSHYSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHP 266

  Fly   223 QAEKEDSANEQSADPAVAAEEDESKQMTLDEWKALRDQ-RAKPNYNLRKAGEGAADNAEWKKMIV 286
            .|:.|:..||     ....:|:..|:||||||||:::: |||..:|:||..|||  :.:|||..|
Human   267 VADTENKENE-----VEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGA--DGQWKKGFV 324

  Fly   287 L--SKKKESNSEDELEYDPSLYPQRVGRLQRIVDIQFNFNDGRKVGFRKGPRPGAGPREGGFRND 349
            |  ||.:|:::||.:.......|......|    ::.||.|   :|     |||.|.|.|    .
Human   325 LHKSKSEEAHAEDSVMDHHFRKPANDITSQ----LEINFGD---LG-----RPGRGGRGG----R 373

  Fly   350 GPRGEGGYRNDGPR 363
            |.||.||..|.|.|
Human   374 GGRGRGGRPNRGSR 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vig2NP_733083.1 HABP4_PAI-RBP1 175..273 CDD:282609 51/128 (40%)
SERBP1NP_001018077.1 IHABP4_N 5..152 CDD:406560 28/144 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..292 70/271 (26%)
HABP4_PAI-RBP1 189..313 CDD:398441 51/128 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..408 25/76 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147229
Domainoid 1 1.000 79 1.000 Domainoid score I8662
eggNOG 1 0.900 - - E1_KOG2945
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 137 1.000 Inparanoid score I4546
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48663
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002116
OrthoInspector 1 1.000 - - mtm8547
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12299
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5307
SonicParanoid 1 1.000 - - X1570
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.890

Return to query results.
Submit another query.