DRSC/TRiP Functional Genomics Resources

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Protein Alignment vig2 and oga1

DIOPT Version :10

Sequence 1:NP_733083.1 Gene:vig2 / 43016 FlyBaseID:FBgn0046214 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_596781.1 Gene:oga1 / 2539743 PomBaseID:SPBC16A3.08C Length:284 Species:Schizosaccharomyces pombe


Alignment Length:299 Identity:77/299 - (25%)
Similarity:106/299 - (35%) Gaps:74/299 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PKKPEPAKAPKAPKSKSEKENKPVVAARKANAPVAKNASPVKGGKGPAGGDVGRPKNPTANGANN 129
            |......|...|.:.|...::.||.....|.:..::...|          :...|:..|.|...:
pombe    17 PAATTTEKKTAASRDKKRSDSPPVPRELVAQSTTSRKRDP----------NQPTPRERTVNKKAD 71

  Fly   130 QGRFNNNQRYGNKESNGEFGNELPQRQFNNR----------DNRGPPRVRTGEKFGKREFDRQSG 184
            |.|.......||:    .|..|..:.:.||.          .||...|.|.|     |||||.|.
pombe    72 QPRRRRQAPQGNE----AFAREGKEARANNAAHPVDATGAPSNRRNARARRG-----REFDRHSQ 127

  Fly   185 SDRTGVKSIDKREGGGAHNWGSPKQDIEDLKTTGETSPQAEKEDSANEQSADPAVAAEEDESKQM 249
            :.|...|...:|      .||       ||..:......||.|  .|..|.....||||:..|  
pombe   128 TGRVDTKKATER------GWG-------DLVNSAANPDVAENE--GNTPSGAQTPAAEEENVK-- 175

  Fly   250 TLDEWKALRDQRAKP-------NYNLRKAGEGAADN--AEWKKMIVLSKKKESNSEDELEYDPSL 305
            ||||:.:.|...|||       ..|..|..:.|.:.  |..||.  .|:||.:..|.:       
pombe   176 TLDEYLSERKSAAKPVGRTVEKLENATKVEKSAPEELFASLKKS--ASQKKSAAKESK------- 231

  Fly   306 YPQRVGRLQRIVDIQFNFNDGRKVGFRKGPRPGAGPREG 344
             |::|     ::||:..|. .|..   :|.||...||.|
pombe   232 -PKKV-----LLDIEQTFT-ARPA---RGGRPNRAPRRG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vig2NP_733083.1 HABP4_PAI-RBP1 175..273 CDD:461421 33/104 (32%)
PRK11634 <339..406 CDD:236941 3/6 (50%)
oga1NP_596781.1 Stm1_N 3..77 CDD:430706 13/69 (19%)

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