DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and foxf1

DIOPT Version :9

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001039226.1 Gene:foxf1 / 734087 XenbaseID:XB-GENE-478922 Length:373 Species:Xenopus tropicalis


Alignment Length:332 Identity:99/332 - (29%)
Similarity:136/332 - (40%) Gaps:96/332 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPR 76
            :|||||||:|..|||..||.:.|.|||||:|:..:|||:|.:.|.|:||:|||||.|:||||:|:
 Frog    53 EKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 117

  Fly    77 NVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVK-QLEKDI-------------SNWKLAAAA 127
            .:.:.|||.|||:.|.:..|||.||..||.:.||.| |..|.:             ..:....|:
 Frog   118 GLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYSMMNGLGFNHIPETYSFQGAS 182

  Fly   128 NT--------------EMVTHYLDDQLTQMAFA-DPARH-----GH----VLANASAAQMSPYKA 168
            .|              .|:..:|...:..|..: .|..|     ||    ....:|....|.:.:
 Frog   183 GTIACPPNSLSLDSGIGMMNGHLPSNVDGMGLSGHPVSHIAANGGHSYMGSCTGSSGGDYSHHDS 247

  Fly   169 TPPIL-------PTTVTQLPARPKRAFTIESLMAPDPASTP----------NEGLVPMEYG---- 212
            ..|:|       |.:|...||         |..||. ||||          |....|:...    
 Frog   248 GSPLLGGGGVMEPHSVYSSPA---------SAWAPS-ASTPYIKQQPLSPCNSAANPLSSSLSSH 302

  Fly   213 SPDAVAL-------------------EKPPFN----LPFNFNELAAQYQLYFPSFFYNGQYGNIP 254
            |.|...|                   :.|..|    ..|:||.:|:.........:|:.|.|   
 Frog   303 SLDQSYLHQNSHNTASELQGIPRYHSQSPSMNDRKEFVFSFNAMASSSMHSGSGSYYHQQVG--- 364

  Fly   255 CYQKTPP 261
             ||...|
 Frog   365 -YQDIKP 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH 13..101 CDD:214627 49/87 (56%)
Alpha_kinase 106..>194 CDD:295997 23/132 (17%)
foxf1NP_001039226.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
Forkhead 53..139 CDD:365978 47/85 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..255 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..306 3/22 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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