DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and Foxf1

DIOPT Version :9

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_006255786.2 Gene:Foxf1 / 687536 RGDID:1584229 Length:447 Species:Rattus norvegicus


Alignment Length:307 Identity:93/307 - (30%)
Similarity:128/307 - (41%) Gaps:75/307 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPR 76
            :|||||||:|..|||..||.:.|.|||||:|:..:|||:|...|.|:||:|||||.|:||||:|:
  Rat   116 EKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK 180

  Fly    77 NVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVK-QLEKDISNW------------------- 121
            .:.:.|||.|||:.|.:..|||.||..||.:.||.| |..|.:.:.                   
  Rat   181 GLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPVYSMVNGLGFNHLPDTYGFQGSG 245

  Fly   122 -------KLAAAANTEMVTHYLDDQLTQMAFAD------PARHGHVL---ANASAAQMSPY--KA 168
                   .||......|:..:|...:..||...      |:..||..   ...|||...|:  .:
  Rat   246 GLSCAPNSLALEGGLGMMNGHLTGNVDGMALPSHSVPHLPSNGGHSYMGGCGGSAAGEYPHHDSS 310

  Fly   169 TP--PILP---------------TTVTQLPARPKRAFTIESLMAPDPASTPNEGLVPMEYGSPDA 216
            .|  |:||               :.....||......:..|.:...|.|..|....|:. ||...
  Rat   311 VPASPLLPAGAGGVMEPHAVYSSSAAAWPPAASAALNSGASYIKQQPLSPCNPAANPLS-GSIST 374

  Fly   217 VALEKPPFNLPFNFNELAAQYQLYFPSFFYNG--QYGNIPCYQKTPP 261
            .:|::|                 |.....:||  :...||.|....|
  Rat   375 HSLDQP-----------------YLHQNSHNGPAELQGIPRYHSQSP 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH 13..101 CDD:214627 49/87 (56%)
Alpha_kinase 106..>194 CDD:295997 25/142 (18%)
Foxf1XP_006255786.2 FH_FOXF1 118..216 CDD:410823 54/97 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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