DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and foxf1

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001073655.1 Gene:foxf1 / 566407 ZFINID:ZDB-GENE-050419-153 Length:380 Species:Danio rerio


Alignment Length:334 Identity:91/334 - (27%)
Similarity:142/334 - (42%) Gaps:96/334 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPR 76
            :|||||||:|..|||..||.:.|.|||||:|:..:|||:|.:.|.|:||:|||||.|:||||:|:
Zfish    51 EKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 115

  Fly    77 NVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVK-QLEK----------------DISNWK-- 122
            .:.:.|||.|||:.|.:..|||.||..||.:.||.| |..|                :..|::  
Zfish   116 GLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPSMYSMMNGLGFNHIPESYNFQGG 180

  Fly   123 ----------LAAAANTEMVTHYLDDQLTQMAFADPARHGHVLANASAAQMSPY----------- 166
                      |:..:...|:..:|...:..|..|     ||.:.:.|......|           
Zfish   181 GGGLSCPPNSLSLESGIGMMNGHLASNMEGMGLA-----GHSMPHLSTNSGHSYMGSCTGSSGTE 240

  Fly   167 ------KATP-----------PILPTTVTQLPARPKRAFTI-ESLMAPDPASTPNEGLVPME--- 210
                  .|:|           .:..:|.:..|:.|..:... .|.:...|.|..|.|...::   
Zfish   241 YPHHDSSASPLLTSGGVMDPHAVYSSTASAWPSAPPTSLNNGTSYIKQQPLSPCNPGASSLQPSL 305

  Fly   211 --------------YGSPDAVALEKPPFNLP---------FNFNELAAQYQLYFP---SFFYNGQ 249
                          :|:.|...:.:.....|         |:||.:.:. .::.|   |::::.|
Zfish   306 PTHSLEQSYLHQNGHGTTDLQGIPRYHTQSPSMCDRKEFVFSFNAMTSS-SMHSPGSSSYYHHQQ 369

  Fly   250 --YGNI-PC 255
              |.:| ||
Zfish   370 VSYQDIKPC 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 53/97 (55%)
foxf1NP_001073655.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
FH_FOXF1 53..151 CDD:410823 54/97 (56%)
Blue background indicates that the domain is not in the aligned region.

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