DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and foxj1

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_012827170.1 Gene:foxj1 / 496834 XenbaseID:XB-GENE-853648 Length:512 Species:Xenopus tropicalis


Alignment Length:202 Identity:65/202 - (32%)
Similarity:94/202 - (46%) Gaps:32/202 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPRN 77
            ||||||.:|..||:..|.:..:.||.||::|.|.|.::|.....||||:|||||.|.|||||||.
 Frog   197 KPPYSYATLICMAMQASKKTKITLSAIYKWITDNFCYFRHADPTWQNSIRHNLSLNKCFIKVPRE 261

  Fly    78 VTKAGKGSYWTLHPMAFDMFENGSLLRRR-------KRFRVKQL-----EKDISNWKLAAAANTE 130
            ..:.|||.:|.:.|...|...||::.:||       ..|...|.     ....|.|:|:..:.:.
 Frog   262 KDEPGKGGFWKIDPQYADRLMNGAMKKRRLPPVQIHPAFASAQAAASGNSNRGSPWQLSVNSESH 326

  Fly   131 MVTHYLDDQLTQMAFADPARHGHVLANASAAQMSPYKATPPILPTTVTQLPARPKRAFTIESLMA 195
            .:....::...:..:.....||.   ||.:...| :|...|:           |||.|     .|
 Frog   327 QLLKEFEEATGEQGWNALGEHGW---NAISDGKS-HKRKQPL-----------PKRMF-----KA 371

  Fly   196 PDPASTP 202
            |..:|:|
 Frog   372 PRLSSSP 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 45/103 (44%)
foxj1XP_012827170.1 FH_FOXJ1 197..275 CDD:410797 39/77 (51%)

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