DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd96Cb and foxj1.2

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001008143.1 Gene:foxj1.2 / 493505 XenbaseID:XB-GENE-919738 Length:371 Species:Xenopus tropicalis


Alignment Length:239 Identity:77/239 - (32%)
Similarity:97/239 - (40%) Gaps:72/239 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPRN 77
            ||||||.:|..||:..|.||.|.||.||.:|...|.:||.....||||:|||||.|.||:||||.
 Frog   109 KPPYSYATLICMAMEASQQRKLTLSAIYSWITQNFCYYRHADPSWQNSIRHNLSLNKCFMKVPRG 173

  Fly    78 VTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWKLAAAANTEMVTHYLDDQLTQ 142
            ..:.|||.:|.:.|...|||.||.|.|||                        |...:||.....
 Frog   174 KDEPGKGGFWQMDPRYADMFVNGVLKRRR------------------------MPASHLDPPRCN 214

  Fly   143 MAFAD--------PARHGHVLANASAAQMSPYKATPPILPTTVTQLPARPKRAFTIESLMAP--- 196
            .|.|.        |:.|.....:....|...|:...|:||                 :|.||   
 Frog   215 KAIAHHPYLPVSRPSSHHMQHISGGHRQSRRYEKPNPVLP-----------------ALRAPERQ 262

  Fly   197 -DPASTPNEGLVPMEYGSPDAVALEKPPFNLPFNFNELAAQYQL 239
             |...||.:   |:: ||               ||::|..|..|
 Frog   263 GDALFTPED---PLQ-GS---------------NFDDLDLQTAL 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 51/96 (53%)
foxj1.2NP_001008143.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..74
COG5025 <61..>262 CDD:227358 66/193 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..99
FH_FOXJ1 109..187 CDD:410797 41/77 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 228..248 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.