DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and foxc2

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_998857.1 Gene:foxc2 / 407875 XenbaseID:XB-GENE-481382 Length:463 Species:Xenopus tropicalis


Alignment Length:318 Identity:104/318 - (32%)
Similarity:145/318 - (45%) Gaps:102/318 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPRN 77
            |||||||:|..|||.::|.:.:.|:.||:||||:|||||:|.|.||||:|||||.|:||:||||:
 Frog    71 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRD 135

  Fly    78 VTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWKLAAAANTEMVTHYLDDQ--- 139
            ..|.||||||||.|.:::||||||.||||:||:    :||:|.         |.....|.||   
 Frog   136 DKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK----KKDVSR---------EKEDRILKDQGKV 187

  Fly   140 ---------------------------LTQMAFADPARHGHVLANASAAQMSP--YKATPPILPT 175
                                       :|::....|       ...||.|.||  ..:||.:  :
 Frog   188 QGPIPSLELPKHDKKIVIKSESPELPVITKVENLSP-------DGGSAMQDSPRSVASTPSV--S 243

  Fly   176 TVTQLPAR--PKRAFTIESLM----------APDPASTPNEGLVPMEYGSPDAVALEKPPFNLPF 228
            |...:|.:  ....|::|::|          :|.||.....|:||                :||.
 Frog   244 TENSIPDQHPASNGFSVENIMTLRTSPHGDLSPVPAVPCRTGMVP----------------SLPI 292

  Fly   229 NFNELAAQY--QLYFPSFFYNGQY-----------GNIPCYQKTPPLF-------HNG 266
            |:.:..:..  |....|...:|.|           |:.|.:...|...       |||
 Frog   293 NYTQTQSSVYSQACTQSMDTSGSYQCSMRAMSLYTGDRPSHMCAPSTLEEATSDHHNG 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 63/96 (66%)
foxc2NP_998857.1 FH_FOXC1 66..158 CDD:410818 55/86 (64%)

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