DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and foxf2a

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001077284.1 Gene:foxf2a / 407681 ZFINID:ZDB-GENE-110407-5 Length:383 Species:Danio rerio


Alignment Length:292 Identity:87/292 - (29%)
Similarity:126/292 - (43%) Gaps:72/292 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRPLKMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNL 65
            |.||       :|||||||:...|||..||.:.|.|||||:|:..:|||:|.:.|.|:||:||||
Zfish    53 MRRP-------EKPPYSYIAPIVMAIQSSPTKRLTLSEIYQFLQARFPFFRGSYQGWKNSVRHNL 110

  Fly    66 SFNDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVK-QLEKDISNWKLAAAANT 129
            |.|:||||:|:.:.:.|||.|||:.|.:..|||.||..||.:.||.| |..|.:...........
Zfish   111 SLNECFIKLPKGLGRPGKGHYWTIDPGSEFMFEEGSFRRRPRGFRRKCQALKPMYRMMNGIGFGA 175

  Fly   130 EMVTHYLDDQ--------------LTQMAFADPARH--------GHVLANASAAQMSPYKATPPI 172
            .|:....|.|              |..|:.|....|        ||.:::.|.:..|.|      
Zfish   176 SMLPQNFDFQSPSASLACHANSYNLDMMSNAVQGVHAGYDGLGAGHHVSHMSPSTGSTY------ 234

  Fly   173 LPTTVTQLPARPKRAFTIESLMAPDPASTPNEGLVPMEYGSPDAVALEKPPFNLPFNFNELAAQY 237
              .|..|:.:..:        ..||.:::|                |..||        .::...
Zfish   235 --MTACQVASNGE--------YGPDSSNSP----------------LHSPP--------TMSGSL 265

  Fly   238 QLYFP--SFFYNGQYGNIPCYQKTPPLFHNGP 267
            :.:.|  :...:|....:..|.|..||..:.|
Zfish   266 ECHSPYGAASAHGASSGVSPYIKQQPLSSSSP 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 55/108 (51%)
foxf2aNP_001077284.1 FH_FOXF1 59..157 CDD:410823 53/97 (55%)

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