DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and Foxl2

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001414120.1 Gene:Foxl2 / 367152 RGDID:1310041 Length:374 Species:Rattus norvegicus


Alignment Length:298 Identity:97/298 - (32%)
Similarity:120/298 - (40%) Gaps:93/298 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPR 76
            |||||||::|.||||..|.::.|.||.||::|:.:||||.||.:.||||:|||||.|:|||||||
  Rat    49 QKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPR 113

  Fly    77 NVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFR------------------------------- 110
            ......||:||||.|...||||.|:..|||:..|                               
  Rat   114 EGGGERKGNYWTLDPACEDMFEKGNYRRRRRMKRPFRPPPAHFQPGKGLFGSGGGAGGCGVPGAG 178

  Fly   111 ---------VKQLEKDISN--W--------------KLAAAANTEMVTHYLDDQLTQMAFADPAR 150
                     .|.|:....|  |              ::||||......         .|.|.|..
  Rat   179 ADGYGYLAPPKYLQSGFLNNSWPLPQPPSPMPYASCQMAAAAAAAAAA---------AAAAGPGS 234

  Fly   151 HGHV-----LANASAAQMSPYK-----ATPPILPTTVTQL---PARP-----------KRAFTIE 191
            .|..     || ..||...||.     |.||.:..:...|   ||.|           ..|..:.
  Rat   235 PGAAAVVKGLA-GPAASYGPYSRVQSMALPPGVVNSYNGLGGPPAAPPPPPPPHPHPHPHAHHLH 298

  Fly   192 SLMAPDPASTPNEGLVPMEYG--SPDAVALEKPPFNLP 227
            :..||.|| .|:.|......|  ||.:.|...||...|
  Rat   299 AAAAPPPA-PPHHGAAAPPPGQLSPASPATAAPPAPAP 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 57/97 (59%)
Foxl2NP_001414120.1 None

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