DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and Foxc1

DIOPT Version :9

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_599165.1 Gene:Foxc1 / 364706 RGDID:1589718 Length:553 Species:Rattus norvegicus


Alignment Length:241 Identity:95/241 - (39%)
Similarity:126/241 - (52%) Gaps:46/241 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PRPLKMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLS 66
            |:|..|    .|||||||:|..|||.::|.:.:.|:.||:||||:|||||.|.|.||||:|||||
  Rat    71 PQPKDM----VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLS 131

  Fly    67 FNDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWKLAAAANTEM 131
            .|:||:||||:..|.||||||||.|.:::||||||.||||:||:.|...||          ..|.
  Rat   132 LNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKD----------KEEK 186

  Fly   132 VTHYLDDQLTQMAFADPARHGHVLANASAAQMSPYKATPPI----LPTTVTQLPARPK------- 185
            ...:|.:.....|...||......|..||    |....||:    :.|.....|:.|:       
  Rat   187 GRLHLQEPPPPQAGRQPAPAPPEQAEGSA----PGPQQPPVRIQDIKTENGTCPSPPQPLSPAAA 247

  Fly   186 ----RAFTIESLMAPDPASTPNEGLVPMEYGSPDAVALEKPPFNLP 227
                .|.|:..:.:||.:|:      .:..||       .||.:||
  Rat   248 LGSGSAATVPKIESPDSSSS------SLSSGS-------SPPGSLP 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH 13..101 CDD:214627 56/87 (64%)
Alpha_kinase 106..>194 CDD:295997 22/102 (22%)
Foxc1NP_599165.1 FH 78..166 CDD:214627 56/87 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11829
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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