DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and fd3F

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster


Alignment Length:163 Identity:46/163 - (28%)
Similarity:73/163 - (44%) Gaps:30/163 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCF- 71
            |...:|||::|..|...|:....:  |.:|.||::|.|:||:|:.|..:|:||:|||||.|..| 
  Fly   396 SKAPKKPPFTYTELIEYALEDKGE--LTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFR 458

  Fly    72 --IKVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKR-----FRVKQLEKDISNWKLAAAANT 129
              :|.|:     |.|..|.:  .:.|..||......:|:     |:::.:             |.
  Fly   459 KGVKAPQ-----GAGHLWAI--SSGDSAENVLAWEHKKQRLDLFFKMESI-------------NR 503

  Fly   130 EMVTHYLDDQLTQMAFADPARHGHVLANASAAQ 162
            |.:..:...|..|.......:|.......||||
  Fly   504 ERIQQHQQQQQLQQHQQQHQQHSPQQKQHSAAQ 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 36/109 (33%)
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 31/78 (40%)

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