DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and Foxh1

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_008763787.1 Gene:Foxh1 / 300054 RGDID:1311275 Length:416 Species:Rattus norvegicus


Alignment Length:208 Identity:57/208 - (27%)
Similarity:86/208 - (41%) Gaps:69/208 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PRPLKMSY-GDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNL 65
            |:..|..| ...||||:|:::.|:              |.|.:...|||:|.:.:.|::|:||||
  Rat    81 PKRRKKRYLRHDKPPYTYLAMIAL--------------IIRQVQAVFPFFRDDYEGWKDSIRHNL 131

  Fly    66 SFNDCFIKVPRNVTK-AGKGSYW----TLHPMAFDMFENGSLLRR-RKRFRVKQLEKDISNWKLA 124
            |.|.||.|||::..| ..||::|    :|.|......:|.:|.|| :.|...:...||:|.:.| 
  Rat   132 SSNRCFRKVPKDPAKPQAKGNFWAVDVSLIPAEALRLQNTALCRRWQNRGTHRAFAKDLSPYVL- 195

  Fly   125 AAANTEMVTHYLDDQLTQMAFADPARHGHVLANASAAQMSPYKATPPILPTTVTQLPARPKRAFT 189
                                      ||           .||:...|         |...:..|:
  Rat   196 --------------------------HG-----------QPYRPPSP---------PPPSREDFS 214

  Fly   190 IESLMA-PDPAST 201
            |:||:. |..|||
  Rat   215 IKSLLGDPGKAST 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 39/114 (34%)
Foxh1XP_008763787.1 FH_FOX 93..157 CDD:469596 29/77 (38%)

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