Protein Alignment fd96Cb and Foxn4

DIOPT Version :10

• Sequence 1: NP_524496.1
• Gene: fd96Cb / 43011
• FlyBaseID: FBgn0004898
• Length: 271
• Species: Drosophila melanogaster
• Sequence 2: NP_001376188.1
• Gene: Foxn4 / 288736
• RGDID: 1306389
• Length: 572
• Species: Rattus norvegicus
• Alignment Length: 309
• Identity: 88/309 - (28%)
• Similarity: 134/309 - (43%)
• Gaps: 78/309 - (25%)

  Fly    13 KPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPRN 77
            ||.|||..|.|||:..|....||:||||.|:.:.||:::.....|:||:|||||.|.||.||...
  Rat   247 KPIYSYSCLIAMALKSSKTGSLPVSEIYSFMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVETK 311

  Fly    78 VT-KAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWK---LAA----AANTEMVTH 134
            .: .:.||..|.|: :|                |:.::|:::..||   |||    .||.|.:..
  Rat   312 PSGSSRKGCLWALN-LA----------------RIDKVEEEMHKWKRKDLAAIHRSMANPEELDK 359

  Fly   135 YLDDQLTQMAFADPARHGH----VLANASAAQMSPYKATPPILPTTVTQLPARPKRAFTIESL-- 193
            .:.|:  ..:...|.:.|.    ||..|:...|     |...|  .::|||.:|....:::|:
  Rat   360 LISDR--PESCRRPGKQGEPEVPVLTRATTVAM-----THSCL--AISQLPPKPLMTLSLQSVPL 415

  Fly   194 ---------MAPD---PASTPNEGLVP-MEYGSPDAVALEKPP---FNLPFNFN----------- 231
                     :|||   ||.||....:| :..|.....|:.:.|   .|:..:.|
  Rat   416 HHQVQPQAHLAPDSPAPAQTPPLHALPNLSPGPLPQPAVGRVPGDFLNISTDTNTEVDALDPSIM 480

  Fly   232 ELAAQYQLY----FPSFFYN--GQYGNIP--CYQKTP---PLFHNGPLP 269
            :.|.|..|:    ..||..:  |.:|:.|  |...||   |:..:|..|
  Rat   481 DFALQGNLWEEMREESFSLDTLGAFGDSPLGCDLGTPSLTPVSGSGDQP 529

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fd96Cb	NP_524496.1	FH_FOX	1..110	CDD:469596	37/97 (38%)
Foxn4	NP_001376188.1	COG5025	<143..>357	CDD:227358	47/126 (37%)
		FH_FOX	242..347	CDD:469596	43/116 (37%)