Protein Alignment fd96Cb and foxn1

DIOPT Version :10

• Sequence 1: NP_524496.1
• Gene: fd96Cb / 43011
• FlyBaseID: FBgn0004898
• Length: 271
• Species: Drosophila melanogaster
• Sequence 2: NP_997738.1
• Gene: foxn1 / 266748
• ZFINID: ZDB-GENE-021008-1
• Length: 565
• Species: Danio rerio
• Alignment Length: 282
• Identity: 70/282 - (24%)
• Similarity: 117/282 - (41%)
• Gaps: 63/282 - (22%)

  Fly     2 PRPLKMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLS 66
            |:||.     .||.|||..|..:|:.:|....||:||||.|:.:.||:::.....|:||:|||||
Zfish   214 PQPLY-----PKPVYSYSILIFLALRNSKTGSLPVSEIYSFMTEHFPYFKTAPDGWKNSVRHNLS 273

  Fly    67 FNDCFIKVP-RNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWK-------L 123
            .|.||.||. :|...:.||..|.|:|.                 :|:::::::..|:       .
Zfish   274 LNKCFEKVENKNGNSSRKGCLWALNPA-----------------KVEKMQEELHKWRRKDPLTVR 321

  Fly   124 AAAANTEMVTHYLDDQLTQMA--FADPARHGHVLANASAAQMSPYKATPPILPTTVTQLPARPKR 186
            .:.|..|.:...|.::..::.  |:.|:.|.|         ..|::..   :.......|....|
Zfish   322 RSMARPEELERLLGERPEKLKSHFSLPSSHTH---------SQPFRVN---MHPAYGHQPVHENR 374

  Fly   187 AFTIESLMAPDPASTPNEGLVPMEYGSPDAVALEKPPFNLPFNFNELAAQYQLYFPSFFYNGQYG 251
            ....::|..|   .|....::|..|.|||.:|.:        .::....|..:..||....|...
Zfish   375 ILNQKALYNP---LTSQNAVLPPPYISPDPLAFQ--------YYSPATHQPSVGHPSSPRTGSLD 428

  Fly   252 NIPCYQKTPPLF-------HNG 266
            : |....|||.:       |:|
Zfish   429 S-PLPAHTPPSYSTALQAGHSG 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fd96Cb	NP_524496.1	FH_FOX	1..110	CDD:469596	39/108 (36%)
foxn1	NP_997738.1	COG5025	<154..>356	CDD:227358	48/172 (28%)
		FH_FOXN1	219..315	CDD:410830	38/112 (34%)