Protein Alignment fd96Cb and Foxa2

DIOPT Version :10

• Sequence 1: NP_524496.1
• Gene: fd96Cb / 43011
• FlyBaseID: FBgn0004898
• Length: 271
• Species: Drosophila melanogaster
• Sequence 2: NP_001386014.1
• Gene: Foxa2 / 25099
• RGDID: 2808
• Length: 465
• Species: Rattus norvegicus
• Alignment Length: 286
• Identity: 110/286 - (38%)
• Similarity: 156/286 - (54%)
• Gaps: 30/286 - (10%)

  Fly     2 PRPLKMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLS 66
            |:..:.||...|||||||||..|||..||.::|.|||||::|||.|||||:|.|:||||:||:||
  Rat   154 PKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLS 218

  Fly    67 FNDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWKLAAAANTEM 131
            |||||:||||:..|.||||:|||||.:.:|||||..|||:|||:   .||.::..:.|.|.:...
  Rat   219 FNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFK---CEKQLALKEAAGAGSGGG 280

  Fly   132 VTHYLDDQLTQMAFADPARHGHVLANASAAQMSPYKATPPILPTT---VTQLPARPKRAFTIESL 193
            .......|.:|:...:.|...   :...|...||:.:..|.....   :::|...|..|     |
  Rat   281 KKTAPGTQASQVQLGEAAGSA---SETPAGTESPHSSASPCQEHKRGGLSELKGTPASA-----L 337

  Fly   194 MAPDPASTPNEG-------LVPMEY-GSPDAVALEKP----PFNLPFNFNELAAQYQLYFPSFFY 246
            ..|:||.:|.:.       |||..: |.|....| ||    .||.||:.|.|.:..|.:..|..:
  Rat   338 SPPEPAPSPGQQQQAAAHLLVPPHHPGLPPEAHL-KPEHHYAFNHPFSINNLMSSEQQHHHSHHH 401

  Fly   247 NGQYG-NIPCYQKTP--PLFHNGPLP 269
            :..:. ::..|::..  |..:..|:|
  Rat   402 HQPHKMDLKTYEQVMHYPGGYGSPMP 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fd96Cb	NP_524496.1	FH_FOX	1..110	CDD:469596	70/107 (65%)
Foxa2	NP_001386014.1	Forkhead_N	23..164	CDD:369872	3/9 (33%)
		FH_FOXA2	163..264	CDD:410813	68/103 (66%)
		COG5025	<164..380	CDD:227358	95/227 (42%)
		HNF_C	380..454	CDD:430552	11/48 (23%)