DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and Foxe1

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_620264.1 Gene:Foxe1 / 192274 RGDID:621723 Length:370 Species:Rattus norvegicus


Alignment Length:224 Identity:96/224 - (42%)
Similarity:119/224 - (53%) Gaps:52/224 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RPLKMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSF 67
            |||:..    |||||||:|.||||.|:|:|.|.|..||:||.::|||||.|.:|||||:||||:.
  Rat    48 RPLQRG----KPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTL 108

  Fly    68 NDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWKLAAAANTEMV 132
            ||||:|:||...:.|||:||.|.|.|.||||:||.|||||||:    ..|:|.:           
  Rat   109 NDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFK----RSDLSTY----------- 158

  Fly   133 THYLDDQLTQMAFADPARHGHVLANASAAQMSPYKATPPILPTTV-TQLPARPKRAFT--IESLM 194
                           || :.|..|.|:||      |...|.|..| ...||.|...:.  ...|.
  Rat   159 ---------------PA-YMHDAAAAAAA------AAAAIFPGAVPAARPAYPGAVYAGYAPPLA 201

  Fly   195 APD----PASTPNE----GLVPMEYGSPD 215
            ||.    ||::|..    ||||....|||
  Rat   202 APPPVYYPAASPGPCRVFGLVPERPLSPD 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 66/106 (62%)
Foxe1NP_620264.1 FH_FOXE 54..142 CDD:410793 55/87 (63%)

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