DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and pha-4

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001041114.1 Gene:pha-4 / 180357 WormBaseID:WBGene00004013 Length:506 Species:Caenorhabditis elegans


Alignment Length:307 Identity:106/307 - (34%)
Similarity:138/307 - (44%) Gaps:90/307 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFI 72
            :||..|||||||||..|||..|..|.|.|||||.:|||.||:|:.|.|:||||:||:|||||||:
 Worm   231 TYGQSKPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRHSLSFNDCFV 295

  Fly    73 KVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWKLAAAANTEMVTHYLD 137
            ||.|:..|.||||:||||....:|||||..|||:|||:||:.|                      
 Worm   296 KVARSPDKPGKGSFWTLHEHCGNMFENGCYLRRQKRFKVKERE---------------------- 338

  Fly   138 DQLTQMAFADPARHGHVLANASAAQMSPYKATPPIL-----PTTVTQ---------LPARPKRAF 188
                      |:|...   ||::.|:...:..|.:.     ||::|.         :|....:..
 Worm   339 ----------PSRKKR---NANSQQLHQQQHIPKMEIKEEDPTSITTTSSLGAYSLIPQISTKKE 390

  Fly   189 TIESLMAPD--PASTPNEGLVPMEYGSPDAVALEKP-------------------------PFNL 226
            ..|.|.|..  .|:..|.||:... |:|.||...:|                         |:..
 Worm   391 IKEELKAVQDATAAAANLGLIDPS-GTPSAVNHSQPTSVISSVGTLGTTQAQMTLNGQYASPYLY 454

  Fly   227 PFNFNELAAQYQ------LY-----FPSFFY-NGQYGNIPCYQKTPP 261
            ..:|..:..|.|      ||     :|...| ||.|.| ..|..|.|
 Worm   455 SSDFATILPQSQNFLNNTLYNTTSSYPGIDYTNGVYQN-TLYSSTNP 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 65/101 (64%)
pha-4NP_001041114.1 FH_FOXA 236..332 CDD:410789 62/95 (65%)

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