DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and pes-1

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001023406.1 Gene:pes-1 / 177267 WormBaseID:WBGene00003976 Length:264 Species:Caenorhabditis elegans


Alignment Length:181 Identity:60/181 - (33%)
Similarity:84/181 - (46%) Gaps:34/181 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQ--KWQNSLRHNLSFNDCFIKV 74
            ::|.|||.:|.||||..||.:.|.:||||::|...|.:| ||.:  :||||:|||||.:..|.||
 Worm    92 KRPKYSYNALIAMAIQSSPFKSLRVSEIYKYISSNFSYY-KNQKPLQWQNSVRHNLSLHKEFRKV 155

  Fly    75 PRNVTKAGKGSYWTL-HPMAFDMF--ENGSLLRRRKRFRVKQLEKDISNWKLAAAANTEMVTHYL 136
            .   |..||||||.: ..:..|::  .|...|||:|.               ..|....|..|:.
 Worm   156 R---TLDGKGSYWAMTADLGTDVYISNNCGKLRRQKS---------------KVAKFPPMQQHFP 202

  Fly   137 DDQLT-----QMAFADPARHGHVLANASAAQMSPYKATP-----PILPTTV 177
            ..||.     |:...:|.....:|.|.....|...:..|     ||:|..:
 Worm   203 IPQLPTQNIHQLCMQNPQILATLLQNMYLQNMQNLQNIPMVPGFPIIPVPI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 46/102 (45%)
pes-1NP_001023406.1 Forkhead 93..168 CDD:459732 40/78 (51%)
rad23 <203..>240 CDD:273167 7/36 (19%)

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