DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and Foxc2

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_038547.2 Gene:Foxc2 / 14234 MGIID:1347481 Length:494 Species:Mus musculus


Alignment Length:285 Identity:103/285 - (36%)
Similarity:134/285 - (47%) Gaps:77/285 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPRN 77
            |||||||:|..|||.::|::.:.|:.||:||||:|||||:|.|.||||:|||||.|:||:||||:
Mouse    71 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRD 135

  Fly    78 VTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWKLAAAANTEMVTHYLDDQLTQ 142
            ..|.||||||||.|.:::||||||.||||:||:.|.:.||           .|...|..:...|.
Mouse   136 DKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKD-----------KEERAHLKEPPSTT 189

  Fly   143 MAFA---DPARHGHVLANASAAQMSPYKATPPILPTTVTQ---------LPARPKRAFTIESLMA 195
            ...|   .|...|...|.......|  :|..|.|| .:|:         |.|.|:.|       :
Mouse   190 AKGAPTGTPVADGPKEAEKKVVVKS--EAASPALP-VITKVETLSPEGALQASPRSA-------S 244

  Fly   196 PDPASTPNEGLVPMEYG--------------------------SPDA--VALEKPPFNLPFNFNE 232
            ..||.:| :|.:|..:.                          ||.|  ..|..||..||:....
Mouse   245 STPAGSP-DGSLPEHHAAAPNGLPGFSVETIMTLRTSPPGGDLSPAAARAGLVVPPLALPYAAAP 308

  Fly   233 LAAQYQLYFPSFFYNGQYGNIPCYQ 257
            .||..|               ||.|
Mouse   309 PAAYTQ---------------PCAQ 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 63/96 (66%)
Foxc2NP_038547.2 FH_FOXC1 66..158 CDD:410818 55/86 (64%)
COG5025 71..>251 CDD:227358 86/200 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 12/57 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267 9/41 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..422
Blue background indicates that the domain is not in the aligned region.

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