DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and foxc1a

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_571803.1 Gene:foxc1a / 100148408 ZFINID:ZDB-GENE-010302-1 Length:476 Species:Danio rerio


Alignment Length:242 Identity:94/242 - (38%)
Similarity:127/242 - (52%) Gaps:49/242 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRPLKM---------------SYGDQ----------KPPYSYISLTAMAIIHSPQRLLPLSEIY 40
            ||.|:.|               :||..          |||||||:|..|||.:||.:.:.|:.||
Zfish    37 MPAPMTMYSHAAHDQYPASMARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNSPDKKVTLNGIY 101

  Fly    41 RFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRR 105
            :|||::|||||.|.|.||||:|||||.|:||:||||:..|.||||||||.|.:::||||||.|||
Zfish   102 QFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRR 166

  Fly   106 RKRFRVKQLEKDISNWKLAAAANTEMVTHYLDDQLTQMAFADPARHGHVLANASAAQMSPYKATP 170
            |:||:.|...||..: :....|.:........:|...:..:.|.|...:......:  :|.:|..
Zfish   167 RRRFKKKDAMKDKED-RGVKEAPSRQAQPQAREQEQSVPGSQPVRIQDIKTENGTS--TPPQAVS 228

  Fly   171 PILPTTVTQLPARPKRAFTIESLMAPDPASTPNEGLVPMEYGSPDAV 217
            |.|.|.       ||    |||   ||.:|:       |..|||.::
Zfish   229 PTLSTV-------PK----IES---PDSSSS-------MSSGSPHSI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 69/133 (52%)
foxc1aNP_571803.1 FH_FOXC1 69..161 CDD:410818 55/91 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..271 26/110 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..303
Blue background indicates that the domain is not in the aligned region.

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