DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and foxg1d

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001116096.1 Gene:foxg1d / 100142648 ZFINID:ZDB-GENE-080305-12 Length:316 Species:Danio rerio


Alignment Length:254 Identity:79/254 - (31%)
Similarity:109/254 - (42%) Gaps:79/254 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RPLKMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSF 67
            :|:|:    .|||:||.:|..|||..||::.|.|:.||.|||..|||||::.|.||||:|||||.
Zfish    56 KPVKL----DKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPFYREHKQGWQNSIRHNLSL 116

  Fly    68 NDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENGSL--LRRRK-----RFRVKQ-----------L 114
            |.||:||||:....|||:||.|.|.:.|:|..|:.  ||||.     :..:|:           :
Zfish   117 NKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSATSRGKLAIKRGLRFSPLGLHGI 181

  Fly   115 EKDISN---WKLAAAANTEMVTHYLDDQLTQMAFADPARHGH------------------VLANA 158
            .:..:|   |:|:...:.....|:.....|...|.:.| ||:                  ||..:
Zfish   182 TETANNPLYWQLSPLLSLHHHHHHPHYNGTSHGFLNQA-HGYGSFVHGVEHLGSREAPRAVLGGS 245

  Fly   159 SAA---------QMSPY--------------------------KATPPILPTTVTQLPA 182
            |.|         ..||.                          .|..|..||....|||
Zfish   246 SGALGLSNGYGMSSSPVGLLSVPSGLLPAPGLQSALGAPQSLRTALGPFTPTGAAALPA 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 56/113 (50%)
foxg1dNP_001116096.1 FH_FOXG 62..140 CDD:410795 46/77 (60%)

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