DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Cb and foxf2

DIOPT Version :10

Sequence 1:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001093702.1 Gene:foxf2 / 100101712 XenbaseID:XB-GENE-484646 Length:381 Species:Xenopus tropicalis


Alignment Length:246 Identity:83/246 - (33%)
Similarity:120/246 - (48%) Gaps:41/246 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPR 76
            :|||||||:|..|||..||.:.|.|||||:|:..:|||:|.:.|.|:||:|||||.|:||||:|:
 Frog    61 EKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQARFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 125

  Fly    77 NVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVK-QLEKDISNWKLAAAANTEMVTHYLDDQ- 139
            .:.:.|||.|||:.|.:..|||.||..||.:.||.| |..|.:.........:|.::....|.| 
 Frog   126 GLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYRMMNGIGFSTSILPQGFDFQA 190

  Fly   140 -------------LTQMAFA-----DPARHGHVLANASAAQMSPYKATPPIL-------PTTVTQ 179
                         |..|:.:     |....||.:.:.|....|.|.|:.|:.       .::.:.
 Frog   191 PPASLTCHSNGYNLDMMSNSMAGGYDGLAGGHHVPHMSPNPGSTYMASCPVSSSGDYGPDSSSSP 255

  Fly   180 LPARPKRAFTIESLMAPDPASTP-----NEGLVPMEYGSPDAVALEKPPFN 225
            :|:.|..|..:|   ...|.::|     :.|..|.....|      .||.|
 Frog   256 VPSSPAMASAME---CHSPYTSPTAHWASSGASPYLKQQP------MPPSN 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 53/97 (55%)
foxf2NP_001093702.1 FH_FOXF1 63..161 CDD:410823 54/97 (56%)

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