DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and foxf1

DIOPT Version :9

Sequence 1:NP_001287516.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001039226.1 Gene:foxf1 / 734087 XenbaseID:XB-GENE-478922 Length:373 Species:Xenopus tropicalis


Alignment Length:360 Identity:106/360 - (29%)
Similarity:156/360 - (43%) Gaps:78/360 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPR 76
            :|||||||:|..|||.|||.|.|.||:||:|:..|||::|.:.|.|:||:|||||.|:||||:|:
 Frog    53 EKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 117

  Fly    77 RPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANL------NRFFFT 135
            ...|||||.||.:.|.:..|||.||..||.:.|   :.....|....:.:..|      ..:.|.
 Frog   118 GLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGF---RRKCQALKPMYSMMNGLGFNHIPETYSFQ 179

  Fly   136 TRNGGSAAHMSPLDMNNAAAMRLDPLPRSTAHMPNSLGPGVPLPHVMP----------ASMSGAD 190
            ..:|..|...:.|.:::...|....||.:...|..|   |.|:.|:..          ...||.|
 Frog   180 GASGTIACPPNSLSLDSGIGMMNGHLPSNVDGMGLS---GHPVSHIAANGGHSYMGSCTGSSGGD 241

  Fly   191 HTNLADMGLTNLPALTSSEIEGPLSL--RPKRSFTIESLITPDKPEHPSEDEDDEDDRVDIDVVE 253
            ::: .|.|   .|.|....:..|.|:  .|..::. .|..||...:.|..               
 Frog   242 YSH-HDSG---SPLLGGGGVMEPHSVYSSPASAWA-PSASTPYIKQQPLS--------------- 286

  Fly   254 CSGISRYPTTPAASEEYMSASRSSRTEDPLPPMHTINAGAHVPFLH---YATGANVAGLPA--SG 313
                   |...||:.  :|:|.||.:.|.             .:||   :.|.:.:.|:|.  |.
 Frog   287 -------PCNSAANP--LSSSLSSHSLDQ-------------SYLHQNSHNTASELQGIPRYHSQ 329

  Fly   314 IPNSPTTYELAISHPLFMMAAPIANMHN---IYYN 345
            .|:.....|...|    ..|...::||:   .||:
 Frog   330 SPSMNDRKEFVFS----FNAMASSSMHSGSGSYYH 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_001287516.1 FH 13..101 CDD:214627 51/87 (59%)
foxf1NP_001039226.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
Forkhead 53..139 CDD:365978 49/85 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..255 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..306 8/46 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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