DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and foxl2a

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001038717.1 Gene:foxl2a / 692279 ZFINID:ZDB-GENE-060512-241 Length:306 Species:Danio rerio


Alignment Length:196 Identity:80/196 - (40%)
Similarity:103/196 - (52%) Gaps:20/196 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPR 76
            |||||||::|.||||..|.||.|.||.||::|..:||:|.||.:.||||:|||||.|:|||||||
Zfish    45 QKPPYSYVALIAMAIRESSEKRLTLSGIYQYIISKFPFYEKNKKGWQNSIRHNLSLNECFIKVPR 109

  Fly    77 RPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFK-------LH-KNDKDLLNEE----LTALANL 129
            ......||.||.|.|...||||.|: .|||:|.|       .| :..|.|...|    |:....|
Zfish   110 EGGGERKGNYWTLDPACEDMFEKGN-YRRRRRMKRPFRPPPTHFQPGKSLFGGEGYGYLSPPKYL 173

  Fly   130 NRFFFTTRNGGSAAHMS----PLDMNNAAAMRLDPLPRSTAHMPNSLGPGVPLPHVMPASMSGAD 190
            ...|.  .|..|.|.||    .:...:.:.:.:..|...:::.|.|....:.||. |..|.:|..
Zfish   174 QSGFI--NNSWSPAPMSYTSCQVSSGSVSPVNMKGLSAPSSYNPYSRVQSIGLPS-MVNSYNGIS 235

  Fly   191 H 191
            |
Zfish   236 H 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 58/97 (60%)
foxl2aNP_001038717.1 FH_FOXL2 46..134 CDD:410802 52/87 (60%)

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