DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd96Ca and foxe1

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_005159967.2 Gene:foxe1 / 567676 ZFINID:ZDB-GENE-061116-1 Length:354 Species:Danio rerio


Alignment Length:376 Identity:117/376 - (31%)
Similarity:162/376 - (43%) Gaps:89/376 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPRR 77
            |||||||:|.:|||.:||::.|.|..||||||:|||:||.|:::||||:||||:.||||||:||.
Zfish    40 KPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQNSIRHNLTLNDCFIKIPRE 104

  Fly    78 PDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANLNRFFFTTRNGGSA 142
            |.|||||.||||.|.|.||||:||.||||||||                    |..|||.:  |.
Zfish   105 PGRPGKGNYWALDPNAEDMFESGSFLRRRKRFK--------------------RSDFTTYS--SY 147

  Fly   143 AHMSPLDMNNAAAMRLDPLPRSTAHMPNS----LGPGVPLPHVMPASMSGADHTNLADMGLTNLP 203
            .|.||:         ..|:..:.:...||    :....|....:|::..           .::.|
Zfish   148 VHESPV---------FSPVQIARSAYANSVYSNMAVSPPYAQQLPSAYY-----------QSSSP 192

  Fly   204 ALTSSEIEGPLSLRPKRSFTIESLI-TPDK--------PEHPSEDEDDEDDRVDI-----DVVEC 254
            ..|:.:         .|.|.|.||| :|::        |:........|.....:     ....|
Zfish   193 NFTAGQ---------SRVFRINSLIGSPNRMGQNAEMIPQQSCRSFSPESGSCSLGGPGFQHQSC 248

  Fly   255 SG---ISRYPTTPAASEEYMSASRSSRTEDPLPPMHTINAGAHVPFLHYATGANVAGLPASGIPN 316
            :|   :|.|.::........|.....:|:...|...|         .||.....:|....|.|..
Zfish   249 NGETVLSCYSSSSNNMAFAYSGPGHGQTQVSYPQAST---------QHYGPAGRMAISSLSPIAG 304

  Fly   317 SPTTYELAISHPLFMMAAPIANMHNIYYNNVTLVAPAQQY-RSPEVQNRID 366
            .      |:..| :...:|......:.|||...|..:..| |.|.....:|
Zfish   305 D------AVGDP-YGRTSPAQLGSFVQYNNSGAVGSSGAYIRHPAYSGNMD 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 67/96 (70%)
foxe1XP_005159967.2 None

Return to query results.
Submit another query.