DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and foxc1

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001007864.1 Gene:foxc1 / 493250 XenbaseID:XB-GENE-479055 Length:495 Species:Xenopus tropicalis


Alignment Length:253 Identity:91/253 - (35%)
Similarity:135/253 - (53%) Gaps:43/253 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PRPSRESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLS 66
            |:|..:..  .|||||||:|..|||.::|||.:.|:.||:||.:|||:||.|.|.||||:|||||
 Frog    70 PQPQPKDM--VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLS 132

  Fly    67 FNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFK-------LHKNDKDLLNEE-- 122
            .|:||:||||...:||||:||.|.|.:::||||||.||||:|||       ..|.|||.|.:|  
 Frog   133 LNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVVKDATKEDKDRLLKEHH 197

  Fly   123 --LTALANLNRFFFTTRNGGSAAHMSPLDMNNAAAMRLDPL--PRSTAHMPNSLGPG------VP 177
              ..|.|...|   ..:.|.:.|...    :.:..:|:..:  ...|:..|.::.|.      :.
 Frog   198 GSQPAAAQQQR---QQQQGQAQAEQD----SGSQPVRIQDIKTENGTSSPPQAMSPALSTVPKIE 255

  Fly   178 LPHVMPASMSGADHTNLADMGLTNLPALTSSEIEGPLSLRP------KRSFTIESLIT 229
            .|....:..||:.|         ::|:..|..:|...|..|      .:.|::::::|
 Frog   256 SPDSSSSMSSGSPH---------SIPSNRSMSLEAAESHHPHQQHHHSQGFSVDNIMT 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 63/107 (59%)
foxc1NP_001007864.1 FH_FOXC1 74..166 CDD:410818 53/93 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..322 28/146 (19%)

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