DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and fkh

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster


Alignment Length:388 Identity:118/388 - (30%)
Similarity:175/388 - (45%) Gaps:76/388 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PRPSRESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLS 66
            |...|.||...|||||||||..|||.::|.:||.||:||:||.|.||:||:|.||||||:||:||
  Fly   199 PTTYRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLS 263

  Fly    67 FNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANLNR 131
            |||||:|:||.||:||||::|.|||.:.:|||||..|||:||||         :|:..|:..|::
  Fly   264 FNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFK---------DEKKEAIRQLHK 319

  Fly   132 ----FFFTTRNGGSAAHMSPLDMNNAAAMRLDPLPRSTAHMPNSLGPGVPLPHVMPASMSGADHT 192
                ......:.|...|.....|::....|||      .|..:....|        ||::|.:..
  Fly   320 SPSHSSLEATSPGKKDHEDSHHMHHHHHSRLD------HHQHHKEAGG--------ASIAGVNVL 370

  Fly   193 NLADMGLTNLPALTSSEIEGPLSLRPKRSFTIESLITPDKPEHPSEDEDDEDDRVDIDVVECSGI 257
            :.|........|:..:..|..||.:|:.        .|....|.......|         |.|.:
  Fly   371 SAAHSKDAEALAMLHANAELCLSQQPQH--------VPTHHHHQHHQLQQE---------ELSAM 418

  Fly   258 SRYPTTPAASEEYMSASRSSRTEDP--LPPMHTINAGAHVPFLHYATGANVAGLPASGIPNSPTT 320
            ......|:...:|.|:....:.|..  .|..|..:....:|   ..:.|::            ..
  Fly   419 MANRCHPSLITDYHSSMHPLKQEPSGYTPSSHPFSINRLLP---TESKADI------------KM 468

  Fly   321 YELAISHPLFMMAAPIANMH-----NIYYNNVTLVAPA-------QQYRSPEVQNRIDNDMRT 371
            |::: .:..:...:|:.|.|     :.||.::...|||       .||  |.. .|.:..:|:
  Fly   469 YDMS-QYAGYNALSPLTNSHAALGQDSYYQSLGYHAPAGTTSLXHHQY--PLAXGRAEQMLRS 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 69/107 (64%)
fkhNP_001263038.1 Forkhead_N <120..209 CDD:369872 4/9 (44%)
FH_dFKH 210..307 CDD:410815 65/96 (68%)

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