DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and foxf2a

DIOPT Version :9

Sequence 1:NP_001287516.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001077284.1 Gene:foxf2a / 407681 ZFINID:ZDB-GENE-110407-5 Length:383 Species:Danio rerio


Alignment Length:381 Identity:107/381 - (28%)
Similarity:168/381 - (44%) Gaps:103/381 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRPSRESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNL 65
            |.||       :|||||||:...|||.|||.|.|.||:||:|:..|||::|.:.|.|:||:||||
Zfish    53 MRRP-------EKPPYSYIAPIVMAIQSSPTKRLTLSEIYQFLQARFPFFRGSYQGWKNSVRHNL 110

  Fly    66 SFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANLN 130
            |.|:||||:|:...|||||.||.:.|.:..|||.||..||.:.|:          .:..||..:.
Zfish   111 SLNECFIKLPKGLGRPGKGHYWTIDPGSEFMFEEGSFRRRPRGFR----------RKCQALKPMY 165

  Fly   131 RFFFTTRNG-GSAAHMSPLDMN----------NAAAMRLDPLPRSTAHMP---NSLGPGVPLPHV 181
            |..    || |..|.|.|.:.:          :|.:..||.:..:...:.   :.||.|..:.|:
Zfish   166 RMM----NGIGFGASMLPQNFDFQSPSASLACHANSYNLDMMSNAVQGVHAGYDGLGAGHHVSHM 226

  Fly   182 MPAS----MSGADHTNLADMGLTNLPALTSSEIEGPLSLRPKRSFTIESLITPDKP-----EHPS 237
            .|::    |:.....:..:.|    |..::|.:..|    |..|.::|.    ..|     .|.:
Zfish   227 SPSTGSTYMTACQVASNGEYG----PDSSNSPLHSP----PTMSGSLEC----HSPYGAASAHGA 279

  Fly   238 EDEDDEDDRVDIDVVECSGISRY-PTTPAASEEYMSASRSSRTEDPLPPMHTINAGAHVPFLHY- 300
            .                ||:|.| ...|.:|    |:..||.....:||.     .....:||: 
Zfish   280 S----------------SGVSPYIKQQPLSS----SSPTSSGLHSSMPPY-----SLEQSYLHHN 319

  Fly   301 -ATGANVAGLPASGIPNSPTTYELAISHPLFMMAAPIANMHN--IYYNNVTLVAPA 353
             ...|:::|:         :.|:   ||     ::|:.:..:  :.:|.:|...|:
Zfish   320 GRDSADISGM---------SRYQ---SH-----SSPVCDRKDFVLNFNGITSFHPS 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_001287516.1 FH 13..101 CDD:214627 50/87 (57%)
foxf2aNP_001077284.1 FH 58..146 CDD:214627 50/87 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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